Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC067959.1-201ENST00000604334 379 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC121247.2-201ENST00000604776 136 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AL109618.2-201ENST00000605527 211 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC006270.3-201ENST00000605967 1036 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 BX005214.3-202ENST00000619809 325 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC006971.1-201ENST00000407916 4486 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 BTBD10P1-201ENST00000549824 1352 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 SAGE2P-201ENST00000420011 2126 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 MTND5P28-201ENST00000438005 1594 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AL022393.1-201ENST00000625142 1677 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 PCAT14-202ENST00000627127 3935 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC093535.2-201ENST00000624769 2326 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 RNU6-984P-201ENST00000363236 109 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 ATP5F1P4-201ENST00000397288 746 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 ARL4AP5-201ENST00000404372 599 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 MIR1284-201ENST00000408337 120 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 NUP35P2-201ENST00000416748 943 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AL358176.3-201ENST00000420757 454 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AL365338.1-201ENST00000422282 858 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 RPS3AP54-201ENST00000435535 734 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 RPL35AP21-201ENST00000437667 333 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 HMGB3P21-201ENST00000452483 547 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 MTCO3P2-201ENST00000457365 171 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC010468.1-201ENST00000461022 817 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 APOOP2-201ENST00000461561 539 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 BZW1P2-201ENST00000473537 826 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC087879.1-201ENST00000474343 374 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC005726.1-201ENST00000494679 427 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AGGF1P8-201ENST00000562979 1000 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 MIR4504-201ENST00000577413 92 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 ZYXP1-201ENST00000617638 118 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC092650.2-201ENST00000619984 902 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC010608.2-201ENST00000624830 470 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 AC107068.1-201ENST00000563286 4218 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 ERCC6-202ENST00000374127 1782 ntBASIC4.6□□□□□ -1.67
HMGB4Q8WW32 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGB4Q8WW32 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AL121657.1-201ENST00000327215 531 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 SNRPEP3-201ENST00000338402 276 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 RNA5SP28-201ENST00000363841 119 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 SNORA4.1-201ENST00000364263 144 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms