Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 AP000769.2-201ENST00000602344 396 ntBASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 AC138965.3-201ENST00000623875 498 ntBASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 AP003400.3-201ENST00000624904 346 ntBASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 CR392039.4-201ENST00000624968 501 ntBASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 AC010266.2-201ENST00000564741 3255 ntBASIC5.24□□□□□ -1.57
TRIM48Q8IWZ4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC125336.1-201ENST00000508893 2827 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 CBX3P1-201ENST00000325243 554 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 Y_RNA.1-201ENST00000352915 104 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 RNU6-483P-201ENST00000384088 108 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 Y_RNA.573-201ENST00000384763 105 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 RN7SKP266-201ENST00000410232 287 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC008280.1-201ENST00000418851 412 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC093655.2-201ENST00000425735 631 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 RPEP2-201ENST00000432149 701 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 RPL17P49-201ENST00000443728 411 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AL161722.1-201ENST00000446972 1032 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 ELOCP23-201ENST00000452014 332 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 HMGN3P1-201ENST00000453847 193 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 RBM43P1-201ENST00000476891 1081 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 RPL15P21-201ENST00000495592 567 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC072052.1-201ENST00000496556 306 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 KCTD9P5-201ENST00000504141 1170 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 OR5M14P-201ENST00000506803 618 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC109635.3-201ENST00000529536 185 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 OR4A12P-201ENST00000530847 918 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AL512360.1-201ENST00000555346 234 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 MIR3682-201ENST00000581338 84 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC090616.5-202ENST00000582111 297 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC008752.3-201ENST00000588113 712 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 CKS1BP3-201ENST00000600888 237 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC069307.1-201ENST00000602820 447 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 RNU4-89P-201ENST00000607443 133 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC015712.7-201ENST00000615211 635 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC012150.2-201ENST00000621300 544 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AL732618.1-201ENST00000623251 301 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC091905.1-201ENST00000624400 311 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC134882.1-201ENST00000603738 1676 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AC117529.2-201ENST00000512159 2068 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 AL078621.3-201ENST00000623707 2042 ntBASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM48Q8IWZ4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 RN7SKP185-201ENST00000362813 326 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 RNU6-181P-201ENST00000363225 107 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 SNORA74A-201ENST00000364089 198 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 COX6CP17-201ENST00000421389 185 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 SETP9-201ENST00000423837 832 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms