Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AC002546.1-201ENST00000588041 2504 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 U8.9-201ENST00000365667 134 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 MIR607-201ENST00000385241 96 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 RNU1-101P-201ENST00000391171 127 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 RN7SKP222-201ENST00000410651 315 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 MTND2P15-201ENST00000418575 892 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AC105402.2-201ENST00000438503 358 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 CEACAMP9-201ENST00000442990 513 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 RPL21P89-201ENST00000444021 467 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AC114755.5-201ENST00000447760 831 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AL590639.1-201ENST00000456484 337 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AC010460.1-201ENST00000507087 466 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 ARL4AP2-201ENST00000507378 601 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 NF1P5-201ENST00000588287 448 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AC006557.5-201ENST00000603126 811 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AC131902.3-201ENST00000611767 581 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AL354798.1-201ENST00000622505 329 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AC112200.1-201ENST00000625015 234 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 AL392088.2-201ENST00000637607 285 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.08□□□□□ -1.92
CCDC58Q4VC31 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC58Q4VC31 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 RPL7P26-201ENST00000333817 754 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 MIR30B-201ENST00000384850 88 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AC104332.2-201ENST00000429959 156 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 ISCA1P2-201ENST00000438679 421 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AC008264.1-201ENST00000447612 367 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 RPL36AP33-201ENST00000450395 310 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 SEC11B-201ENST00000518383 499 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 C1GALT1P3-201ENST00000522049 819 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 OR2BH1P-201ENST00000608850 864 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AC032011.1-201ENST00000611703 1549 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC58Q4VC31 AC093831.2-201ENST00000624393 3427 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.07□□□□□ -1.92
CCDC58Q4VC31 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 AL356274.2-201ENST00000624379 3752 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 U3.11-201ENST00000364476 212 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 MT-TP-201ENST00000387461 68 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 SNORA26.7-201ENST00000391288 122 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 RPL7P60-201ENST00000397636 735 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 CRYBB2P1-203ENST00000415709 538 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 AL117339.2-201ENST00000430475 180 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 HMGB1P45-201ENST00000435986 653 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 HSFY6P-201ENST00000445573 403 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 ELL2P4-201ENST00000446870 1376 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 SSXP4-201ENST00000451349 245 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 AC097262.1-201ENST00000452559 548 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 MTATP6P22-201ENST00000507369 598 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms