Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC090186.1-201ENST00000605991 572 ntBASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 AL161616.1-201ENST00000611867 286 ntBASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 MIR378J-201ENST00000611988 109 ntBASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 AL133243.1-201ENST00000614487 366 ntBASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 AC015914.2-201ENST00000618167 288 ntBASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 AC008758.3-201ENST00000507003 1829 ntBASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 IQCB2P-201ENST00000401788 1633 ntBASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 AC097714.1-201ENST00000511272 1647 ntBASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 AL022311.1-201ENST00000623726 19416 ntBASIC5.8□□□□□ -1.48
CCDC144BQ3MJ40 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 ZNF734P-201ENST00000419494 1534 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC063976.2-201ENST00000425667 3556 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 RNU4-44P-201ENST00000363050 141 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 U3.4-201ENST00000363352 213 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 RNVU1-3-201ENST00000364313 161 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC019155.1-201ENST00000382242 574 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 GLULP6-201ENST00000399502 913 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 DHFRP6-201ENST00000401776 268 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 MIR1305-201ENST00000408300 86 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 RPS27AP14-201ENST00000422868 454 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 OR51AB1P-201ENST00000429046 620 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AL161722.2-201ENST00000434731 981 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AL356276.2-201ENST00000435919 558 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AL138878.2-201ENST00000440581 1241 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 MTND5P14-201ENST00000441481 1267 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 MTCO1P27-201ENST00000448269 226 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 SUMO2P2-201ENST00000456482 255 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC104563.1-201ENST00000476147 376 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC017015.1-201ENST00000477387 286 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 RN7SL459P-201ENST00000481078 302 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 MTND3P5-201ENST00000512798 333 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 RPL12P22-201ENST00000519073 490 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 BGLT3-201ENST00000564523 994 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC053481.3-201ENST00000577881 843 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 OR4G1P-201ENST00000588632 938 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 YWHAQP7-201ENST00000603536 658 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AL133338.2-201ENST00000604292 736 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC068276.1-201ENST00000605793 379 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC015871.5-202ENST00000623252 701 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC025048.6-202ENST00000627667 438 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 AC104260.2-201ENST00000623551 3497 ntBASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC144BQ3MJ40 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AL121657.1-201ENST00000327215 531 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 SNORA66-201ENST00000384792 133 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 RNU6-952P-201ENST00000391164 108 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC025750.1-201ENST00000399891 379 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 MTATP6P27-201ENST00000416987 621 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 CYCSP10-201ENST00000417973 294 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC069213.2-201ENST00000420238 366 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 RPS27AP7-201ENST00000422792 455 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms