Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 NOP56P3-201ENST00000549457 385 ntBASIC3.18□□□□□ -1.9
USF2Q15853 GNRHR2P1-201ENST00000555315 631 ntBASIC3.18□□□□□ -1.9
USF2Q15853 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USF2Q15853 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.18□□□□□ -1.9
USF2Q15853 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.18□□□□□ -1.9
USF2Q15853 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.18□□□□□ -1.9
USF2Q15853 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.18□□□□□ -1.9
USF2Q15853 EIF1P6-201ENST00000600054 334 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AC242628.1-201ENST00000606810 391 ntBASIC3.18□□□□□ -1.9
USF2Q15853 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.18□□□□□ -1.9
USF2Q15853 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.18□□□□□ -1.9
USF2Q15853 AC068831.7-201ENST00000616954 363 ntBASIC3.18□□□□□ -1.9
USF2Q15853 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.18□□□□□ -1.9
USF2Q15853 AC020923.1-201ENST00000624021 917 ntBASIC3.18□□□□□ -1.9
USF2Q15853 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.18□□□□□ -1.9
USF2Q15853 AL773545.4-201ENST00000637262 310 ntBASIC3.18□□□□□ -1.9
USF2Q15853 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
USF2Q15853 AL513478.4-201ENST00000641636 310 ntBASIC3.18□□□□□ -1.9
USF2Q15853 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
USF2Q15853 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.18□□□□□ -1.9
USF2Q15853 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.18□□□□□ -1.9
USF2Q15853 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.18□□□□□ -1.9
USF2Q15853 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.17□□□□□ -1.9
USF2Q15853 SNORA62-201ENST00000365493 153 ntBASIC3.17□□□□□ -1.9
USF2Q15853 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
USF2Q15853 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
USF2Q15853 RN7SKP182-201ENST00000410772 298 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC011933.1-201ENST00000413334 321 ntBASIC3.17□□□□□ -1.9
USF2Q15853 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 AL512504.1-201ENST00000415494 778 ntBASIC3.17□□□□□ -1.9
USF2Q15853 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.17□□□□□ -1.9
USF2Q15853 YPEL5P1-201ENST00000419731 367 ntBASIC3.17□□□□□ -1.9
USF2Q15853 COX6CP17-201ENST00000421389 185 ntBASIC3.17□□□□□ -1.9
USF2Q15853 RPS27AP7-201ENST00000422792 455 ntBASIC3.17□□□□□ -1.9
USF2Q15853 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 DPPA2P1-201ENST00000428060 556 ntBASIC3.17□□□□□ -1.9
USF2Q15853 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 GOT2P5-201ENST00000433995 546 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.17□□□□□ -1.9
USF2Q15853 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.17□□□□□ -1.9
USF2Q15853 AC004865.1-201ENST00000442276 1003 ntBASIC3.17□□□□□ -1.9
USF2Q15853 VN1R25P-201ENST00000443385 738 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.17□□□□□ -1.9
USF2Q15853 AC140076.1-201ENST00000449897 361 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC233982.1-201ENST00000451247 436 ntBASIC3.17□□□□□ -1.9
USF2Q15853 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.17□□□□□ -1.9
USF2Q15853 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 VN1R40P-201ENST00000455196 941 ntBASIC3.17□□□□□ -1.9
USF2Q15853 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.17□□□□□ -1.9
USF2Q15853 AC116533.1-201ENST00000459748 321 ntBASIC3.17□□□□□ -1.9
USF2Q15853 RPL21P8-201ENST00000465083 535 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC017015.1-201ENST00000477387 286 ntBASIC3.17□□□□□ -1.9
USF2Q15853 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.17□□□□□ -1.9
USF2Q15853 RPL31P61-201ENST00000496160 376 ntBASIC3.17□□□□□ -1.9
USF2Q15853 HPRT1P2-201ENST00000505250 544 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC025674.1-201ENST00000507074 324 ntBASIC3.17□□□□□ -1.9
USF2Q15853 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.17□□□□□ -1.9
USF2Q15853 RNU7-143P-201ENST00000516781 65 ntBASIC3.17□□□□□ -1.9
USF2Q15853 C1GALT1P3-201ENST00000522049 819 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.17□□□□□ -1.9
USF2Q15853 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.17□□□□□ -1.9
USF2Q15853 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.17□□□□□ -1.9
USF2Q15853 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 AC012182.1-201ENST00000570133 895 ntBASIC3.17□□□□□ -1.9
USF2Q15853 CBX3P2-202ENST00000583365 535 ntBASIC3.17□□□□□ -1.9
USF2Q15853 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 AL161729.3-201ENST00000603533 673 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.17□□□□□ -1.9
USF2Q15853 AC008745.1-201ENST00000604064 271 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC104662.1-201ENST00000604448 511 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC018618.2-201ENST00000604770 446 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC090246.1-201ENST00000616499 426 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.17□□□□□ -1.9
USF2Q15853 AL590240.3-201ENST00000621416 943 ntBASIC3.17□□□□□ -1.9
USF2Q15853 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.17□□□□□ -1.9
USF2Q15853 CASC19-261ENST00000641853 1638 ntBASIC3.17□□□□□ -1.9
USF2Q15853 AC116096.1-201ENST00000566804 2314 ntBASIC3.17□□□□□ -1.9
USF2Q15853 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.17□□□□□ -1.9
USF2Q15853 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.17□□□□□ -1.9
USF2Q15853 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
USF2Q15853 AL079305.1-201ENST00000623159 3008 ntBASIC3.17□□□□□ -1.9
USF2Q15853 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USF2Q15853 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.16□□□□□ -1.9
USF2Q15853 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
USF2Q15853 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USF2Q15853 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.16□□□□□ -1.9
USF2Q15853 AL512646.1-201ENST00000269395 1077 ntBASIC3.16□□□□□ -1.9
USF2Q15853 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.16□□□□□ -1.9
USF2Q15853 Y_RNA.493-201ENST00000384422 102 ntBASIC3.16□□□□□ -1.9
USF2Q15853 MT-TC-201ENST00000387405 66 ntBASIC3.16□□□□□ -1.9
USF2Q15853 RNU6-837P-201ENST00000391056 108 ntBASIC3.16□□□□□ -1.9
USF2Q15853 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USF2Q15853 LIPT1P1-201ENST00000415870 1186 ntBASIC3.16□□□□□ -1.9
USF2Q15853 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms