Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 RPS29P22-201ENST00000472363 168 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 AC015724.1-201ENST00000478577 156 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 AC013828.1-201ENST00000481845 158 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 RPS27P23-201ENST00000487608 251 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXF2Q12947 PTGES3P3-201ENST00000511479 482 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 AC098976.1-201ENST00000513014 541 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 RNU6-358P-201ENST00000516564 75 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 RNA5SP135-201ENST00000517019 125 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
FOXF2Q12947 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXF2Q12947 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXF2Q12947 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXF2Q12947 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXF2Q12947 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXF2Q12947 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXF2Q12947 KPNA2P3-201ENST00000584190 848 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 DUXAP4-201ENST00000603046 613 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXF2Q12947 AC079228.1-201ENST00000624774 1049 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.43□□□□□ -1.7
FOXF2Q12947 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 SAMMSON-226ENST00000642089 1582 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
FOXF2Q12947 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXF2Q12947 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF2Q12947 AC012618.3-205ENST00000637896 1496 ntBASIC4.43□□□□□ -1.7
FOXF2Q12947 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF2Q12947 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF2Q12947 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF2Q12947 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
FOXF2Q12947 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 AC097461.1-201ENST00000568928 2821 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 AC006026.1-201ENST00000444025 1803 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AC099654.2-201ENST00000433031 1980 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF2Q12947 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF2Q12947 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
FOXF2Q12947 RNU5F-6P-201ENST00000362979 116 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 RNVU1-6-201ENST00000364688 164 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
FOXF2Q12947 RNU6-729P-201ENST00000384399 107 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 RNA5SP187-201ENST00000384400 119 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 RNU6-692P-201ENST00000384496 107 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 RNU6-297P-201ENST00000384636 107 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
FOXF2Q12947 SNORA40.3-201ENST00000390964 122 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 SNORA48.4-201ENST00000391089 134 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 EI24P3-201ENST00000399046 1062 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AL136131.1-201ENST00000406079 803 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 EEF1A1P40-201ENST00000412883 573 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 BOLA3P4-201ENST00000418151 400 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AIMP1P1-201ENST00000418670 937 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXF2Q12947 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF2Q12947 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXF2Q12947 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 UBE2FP3-201ENST00000436366 524 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 CYCSP11-201ENST00000436426 315 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AL450263.2-201ENST00000439400 589 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 RPS7P5-201ENST00000441482 581 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AL022238.1-201ENST00000442557 355 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 RPS29P33-201ENST00000456717 146 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXF2Q12947 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXF2Q12947 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 AC108078.3-201ENST00000502633 489 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 GAPDHP56-201ENST00000506031 988 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF2Q12947 AC117522.3-201ENST00000507974 584 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 MTCO1P35-201ENST00000515270 228 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXF2Q12947 OR5AQ1P-201ENST00000527596 927 ntBASIC4.42□□□□□ -1.7
FOXF2Q12947 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.42□□□□□ -1.7
FOXF2Q12947 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.42□□□□□ -1.7
FOXF2Q12947 BNIP3P1-201ENST00000547295 580 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms