Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC012065.2-201ENST00000421295 375 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 BEND7P1-201ENST00000422058 457 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC099677.3-201ENST00000427081 395 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH1Q08174 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH1Q08174 RPS20P5-201ENST00000434808 360 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AL138899.2-201ENST00000439139 499 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 RPS7P3-201ENST00000443360 580 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 RPS26P56-201ENST00000444468 240 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AL035090.1-201ENST00000454835 332 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC093166.4-201ENST00000457867 318 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC027575.1-201ENST00000481064 460 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC055855.1-201ENST00000489563 579 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC114797.1-201ENST00000514003 728 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC105417.1-201ENST00000514691 285 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 RNU6-559P-201ENST00000516151 98 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 SNORD27.1-201ENST00000516319 72 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 Y_RNA.711-201ENST00000516993 102 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH1Q08174 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PCDH1Q08174 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AL355836.1-201ENST00000555951 870 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC053481.3-201ENST00000577881 843 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC105224.1-201ENST00000587055 421 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDH1Q08174 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC008737.2-201ENST00000599446 118 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC068790.3-201ENST00000602988 553 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC124916.2-201ENST00000604416 224 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AL136131.3-201ENST00000607600 188 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH1Q08174 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AC040168.1-201ENST00000623594 991 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AL133216.2-202ENST00000634512 349 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC016745.2-201ENST00000608834 3443 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AL591135.1-201ENST00000401578 5914 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 MTND5P16-201ENST00000460269 1703 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 PWAR1-201ENST00000624188 2414 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDH1Q08174 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 AC012254.3-201ENST00000591183 2117 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PCDH1Q08174 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDH1Q08174 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 RNA5SP279-201ENST00000365513 117 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
PCDH1Q08174 RNU6-1207P-201ENST00000384343 107 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 RNU6-1297P-201ENST00000384415 104 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PCDH1Q08174 RN7SKP235-201ENST00000410662 305 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDH1Q08174 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDH1Q08174 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDH1Q08174 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH1Q08174 RPL31P45-201ENST00000419532 356 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH1Q08174 Z82205.1-201ENST00000428456 297 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 AC096775.1-201ENST00000437724 448 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDH1Q08174 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDH1Q08174 AL590639.1-201ENST00000456484 337 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.75□□□□□ -1.49
PCDH1Q08174 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDH1Q08174 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH1Q08174 IGKV3D-25-201ENST00000519599 235 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH1Q08174 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.75□□□□□ -1.49
PCDH1Q08174 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH1Q08174 AP005119.1-201ENST00000580956 292 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 AP001029.3-201ENST00000588063 596 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms