Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 EI24P1-201ENST00000416584 867 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 MTCYBP7-201ENST00000419540 1134 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 BX890604.2-201ENST00000427883 474 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AL590103.1-201ENST00000434488 307 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 HSPE1P28-201ENST00000443139 211 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 RPS27P5-201ENST00000444247 244 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 H2AFZP6-201ENST00000444403 394 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 VN1R48P-201ENST00000448149 1036 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 HMGN2P16-201ENST00000456802 261 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC007688.1-201ENST00000475592 759 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC108860.1-201ENST00000484521 383 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 RN7SL283P-201ENST00000489055 303 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 FCF1P3-201ENST00000496394 590 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 POU5F1P7-201ENST00000508759 541 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC093853.1-201ENST00000515689 483 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 RNA5SP385-201ENST00000515947 110 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 MIR5685-201ENST00000579080 79 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AP000919.1-202ENST00000581139 1264 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC091488.1-201ENST00000604239 660 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.71□□□□□ -1.98
HIST1H1AQ02539 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H1AQ02539 AC116096.1-201ENST00000566804 2314 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 MIR30E-201ENST00000362104 92 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 SNORA70E-201ENST00000384492 135 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 U3.39-201ENST00000408569 239 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 HMGB3P23-201ENST00000414981 585 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AC068533.1-201ENST00000418542 415 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 SDCBPP3-201ENST00000419629 891 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 FAR1P1-201ENST00000427163 934 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AP000907.1-201ENST00000428428 510 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 GOT2P5-201ENST00000433995 546 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AC006994.1-201ENST00000438212 839 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 HIGD1AP11-201ENST00000438361 280 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AC074367.1-201ENST00000438685 1125 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AL645931.1-201ENST00000439737 410 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 RPS3AP46-201ENST00000448352 682 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 RPL21P8-201ENST00000465083 535 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 RPL23AP12-201ENST00000467573 473 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 HMGN1P11-201ENST00000508668 303 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 TMEM248P1-201ENST00000510579 951 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 RN7SKP234-201ENST00000517173 224 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 RNA5SP196-201ENST00000625967 102 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AC006042.3-201ENST00000454684 1469 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HIST1H1AQ02539 AC068647.1-201ENST00000489539 2265 ntBASIC2.7□□□□□ -1.98
HIST1H1AQ02539 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AL355578.1-201ENST00000607405 1328 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 MTND5P7-201ENST00000413558 1798 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AC090337.1-201ENST00000579651 2074 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 RN7SKP280-201ENST00000364196 304 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 RN7SKP227-201ENST00000364445 330 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms