Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 RNU6-694P-201ENST00000364071 147 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 Y_RNA.248-201ENST00000364501 109 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 SNORA75-201ENST00000384158 137 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 AP000580.1-201ENST00000404439 358 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 MTCYBP38-201ENST00000417160 1123 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 EIF1P1-201ENST00000421436 341 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 TDGF1P1-201ENST00000445734 527 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 ARL2BPP10-201ENST00000446487 531 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 HMGB1P16-201ENST00000447155 540 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 RPL36AP33-201ENST00000450395 310 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 SNRPGP9-201ENST00000456025 225 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC096751.1-202ENST00000502691 1067 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 RPL37P25-201ENST00000507308 276 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC109445.1-201ENST00000512356 383 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 RPS27AP18-201ENST00000515536 459 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 SMARCE1P4-201ENST00000523647 241 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 AP003392.2-201ENST00000527269 208 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 AP005205.1-201ENST00000563503 508 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 MIR4715-201ENST00000584117 79 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 ELOCP28-201ENST00000590044 317 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 RPL12P25-202ENST00000598100 674 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 AL121873.1-201ENST00000616013 524 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 AL136981.2-201ENST00000617319 734 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC007342.8-201ENST00000623278 678 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC127502.3-201ENST00000636170 1206 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC073544.1-201ENST00000600110 1595 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 OR14L1P-202ENST00000641545 3009 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC092447.7-201ENST00000422212 1621 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.89□□□□□ -1.63
CACNA2D1P54289 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 AC135352.1-201ENST00000506173 1418 ntBASIC4.89□□□□□ -1.63
CACNA2D1P54289 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CACNA2D1P54289 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CACNA2D1P54289 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CACNA2D1P54289 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CACNA2D1P54289 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CACNA2D1P54289 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CACNA2D1P54289 AL121657.1-201ENST00000327215 531 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 MIR141-201ENST00000384975 95 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 SNORD96B-201ENST00000386148 79 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 RPS3AP23-201ENST00000401762 784 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 MIR548F1-201ENST00000408667 84 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 RNU2-66P-201ENST00000410650 161 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 Z99497.1-201ENST00000421282 135 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 AC004448.2-201ENST00000422360 586 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 RPS27AP7-201ENST00000422792 455 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 CYCSP46-201ENST00000423569 204 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 ST13P20-201ENST00000447996 1065 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 TPT1P13-201ENST00000449760 499 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 PSMC1P13-201ENST00000458195 985 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.88□□□□□ -1.63
CACNA2D1P54289 SCARNA10-201ENST00000459255 330 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 AC072039.1-201ENST00000477611 581 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 AC025164.1-201ENST00000496249 478 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 AC138853.1-201ENST00000503549 823 ntBASIC4.88□□□□□ -1.63
CACNA2D1P54289 BNIP3P41-201ENST00000503774 571 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms