Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC073143.1-201ENST00000436316 395 ntBASIC2.41□□□□□ -2.02
CKS2P33552 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS2P33552 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.41□□□□□ -2.02
CKS2P33552 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS2P33552 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.41□□□□□ -2.02
CKS2P33552 RPS27AP1-201ENST00000475545 471 ntBASIC2.41□□□□□ -2.02
CKS2P33552 AC012181.1-201ENST00000479895 423 ntBASIC2.41□□□□□ -2.02
CKS2P33552 RPL31P13-201ENST00000484151 370 ntBASIC2.41□□□□□ -2.02
CKS2P33552 RPL32P9-201ENST00000487963 407 ntBASIC2.41□□□□□ -2.02
CKS2P33552 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS2P33552 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS2P33552 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.41□□□□□ -2.02
CKS2P33552 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.41□□□□□ -2.02
CKS2P33552 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS2P33552 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS2P33552 AC023575.1-201ENST00000580510 358 ntBASIC2.41□□□□□ -2.02
CKS2P33552 MIR5096-201ENST00000583713 70 ntBASIC2.41□□□□□ -2.02
CKS2P33552 KPNA2P3-201ENST00000584190 848 ntBASIC2.41□□□□□ -2.02
CKS2P33552 AC006116.10-201ENST00000591836 581 ntBASIC2.41□□□□□ -2.02
CKS2P33552 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS2P33552 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS2P33552 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS2P33552 MIR6862-1-201ENST00000613016 70 ntBASIC2.41□□□□□ -2.02
CKS2P33552 MIR6862-2-201ENST00000614755 70 ntBASIC2.41□□□□□ -2.02
CKS2P33552 AL356321.1-201ENST00000621360 228 ntBASIC2.41□□□□□ -2.02
CKS2P33552 AP000346.3-201ENST00000622821 210 ntBASIC2.41□□□□□ -2.02
CKS2P33552 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CKS2P33552 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS2P33552 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS2P33552 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.41□□□□□ -2.02
CKS2P33552 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CKS2P33552 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CKS2P33552 MTND5P24-201ENST00000438892 1767 ntBASIC2.41□□□□□ -2.02
CKS2P33552 CCT8P1-201ENST00000413611 1657 ntBASIC2.41□□□□□ -2.02
CKS2P33552 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.4□□□□□ -2.02
CKS2P33552 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.4□□□□□ -2.03
CKS2P33552 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CKS2P33552 OR2AS1P-201ENST00000427827 319 ntBASIC2.4□□□□□ -2.03
CKS2P33552 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.4□□□□□ -2.03
CKS2P33552 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.4□□□□□ -2.03
CKS2P33552 HMGB1P45-201ENST00000435986 653 ntBASIC2.4□□□□□ -2.03
CKS2P33552 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.4□□□□□ -2.03
CKS2P33552 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.4□□□□□ -2.03
CKS2P33552 CBX1P4-201ENST00000439415 457 ntBASIC2.4□□□□□ -2.03
CKS2P33552 AC006326.1-201ENST00000445465 787 ntBASIC2.4□□□□□ -2.03
CKS2P33552 CYCSP42-201ENST00000450823 238 ntBASIC2.4□□□□□ -2.03
CKS2P33552 HMGN2P16-201ENST00000456802 261 ntBASIC2.4□□□□□ -2.03
CKS2P33552 ARPC3P2-201ENST00000457786 533 ntBASIC2.4□□□□□ -2.03
CKS2P33552 RPL7P5-201ENST00000471472 736 ntBASIC2.4□□□□□ -2.03
CKS2P33552 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.4□□□□□ -2.03
CKS2P33552 AC147055.1-201ENST00000509261 750 ntBASIC2.4□□□□□ -2.03
CKS2P33552 RNA5SP385-201ENST00000515947 110 ntBASIC2.4□□□□□ -2.03
CKS2P33552 RN7SKP244-201ENST00000516513 307 ntBASIC2.4□□□□□ -2.03
CKS2P33552 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.4□□□□□ -2.03
CKS2P33552 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.4□□□□□ -2.03
CKS2P33552 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.4□□□□□ -2.03
CKS2P33552 OR4R3P-201ENST00000525084 838 ntBASIC2.4□□□□□ -2.03
CKS2P33552 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.4□□□□□ -2.03
CKS2P33552 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.4□□□□□ -2.03
CKS2P33552 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.4□□□□□ -2.03
CKS2P33552 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CKS2P33552 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC2.4□□□□□ -2.03
CKS2P33552 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.4□□□□□ -2.03
CKS2P33552 MIR3939-201ENST00000582614 106 ntBASIC2.4□□□□□ -2.03
CKS2P33552 AC067852.3-201ENST00000589177 561 ntBASIC2.4□□□□□ -2.03
CKS2P33552 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.4□□□□□ -2.03
CKS2P33552 AL451074.6-201ENST00000608512 729 ntBASIC2.4□□□□□ -2.03
CKS2P33552 Mico1.1-201ENST00000611698 204 ntBASIC2.4□□□□□ -2.03
CKS2P33552 MIR6719-201ENST00000622428 87 ntBASIC2.4□□□□□ -2.03
CKS2P33552 AL354798.1-201ENST00000622505 329 ntBASIC2.4□□□□□ -2.03
CKS2P33552 CR383658.2-201ENST00000547576 1525 ntBASIC2.4□□□□□ -2.03
CKS2P33552 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CKS2P33552 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.4□□□□□ -2.03
CKS2P33552 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CKS2P33552 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.4□□□□□ -2.03
CKS2P33552 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.4□□□□□ -2.03
CKS2P33552 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.4□□□□□ -2.03
CKS2P33552 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CKS2P33552 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CKS2P33552 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CKS2P33552 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
CKS2P33552 AL645937.1-201ENST00000641739 1652 ntBASIC2.39□□□□□ -2.03
CKS2P33552 SNORD9-201ENST00000362566 104 ntBASIC2.39□□□□□ -2.03
CKS2P33552 RNA5SP295-201ENST00000362655 121 ntBASIC2.39□□□□□ -2.03
CKS2P33552 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CKS2P33552 CYB5AP4-201ENST00000396692 399 ntBASIC2.39□□□□□ -2.03
CKS2P33552 RPL32P23-201ENST00000397237 405 ntBASIC2.39□□□□□ -2.03
CKS2P33552 RN7SKP278-201ENST00000410504 342 ntBASIC2.39□□□□□ -2.03
CKS2P33552 RPL23AP69-201ENST00000431134 458 ntBASIC2.39□□□□□ -2.03
CKS2P33552 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.39□□□□□ -2.03
CKS2P33552 CCRL1P1-201ENST00000449542 1053 ntBASIC2.39□□□□□ -2.03
CKS2P33552 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.39□□□□□ -2.03
CKS2P33552 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.39□□□□□ -2.03
CKS2P33552 OR7L1P-201ENST00000456181 380 ntBASIC2.39□□□□□ -2.03
CKS2P33552 AC091179.1-201ENST00000461606 579 ntBASIC2.39□□□□□ -2.03
CKS2P33552 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CKS2P33552 AC010460.1-201ENST00000507087 466 ntBASIC2.39□□□□□ -2.03
CKS2P33552 MTND4LP22-201ENST00000508209 276 ntBASIC2.39□□□□□ -2.03
CKS2P33552 HMGN1P11-201ENST00000508668 303 ntBASIC2.39□□□□□ -2.03
CKS2P33552 APOOP4-201ENST00000513530 597 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms