Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD40LGP29965 SNORA48.8-201ENST00000391324 134 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 ENSAP1-201ENST00000392855 326 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 AL049693.1-201ENST00000402760 611 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 AL138880.1-201ENST00000405824 642 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 HMGB3P23-201ENST00000414981 585 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.28□□□□□ -1.88
CD40LGP29965 FAR1P1-201ENST00000427163 934 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.28□□□□□ -1.88
CD40LGP29965 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.28□□□□□ -1.88
CD40LGP29965 HMGN2P20-201ENST00000437531 273 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 Z77249.1-201ENST00000444622 1175 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 AC099563.1-201ENST00000456086 418 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 ARPC3P2-201ENST00000457786 533 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 RPL5P24-201ENST00000463742 885 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.28□□□□□ -1.88
CD40LGP29965 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD40LGP29965 PCNAP1-201ENST00000505363 709 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 RAC1P2-201ENST00000511164 579 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 AC099522.1-202ENST00000514718 367 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 HIGD1AP3-201ENST00000515857 278 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.28□□□□□ -1.88
CD40LGP29965 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD40LGP29965 TRAV8-5-201ENST00000537369 341 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 AC091516.1-201ENST00000549191 703 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 POLR2KP1-201ENST00000553226 168 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 AL163153.1-201ENST00000554223 283 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD40LGP29965 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.28□□□□□ -1.88
CD40LGP29965 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.28□□□□□ -1.88
CD40LGP29965 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.28□□□□□ -1.88
CD40LGP29965 AL357559.1-201ENST00000622228 274 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.28□□□□□ -1.88
CD40LGP29965 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD40LGP29965 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD40LGP29965 AC002546.1-201ENST00000588041 2504 ntBASIC3.28□□□□□ -1.88
CD40LGP29965 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CD40LGP29965 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CD40LGP29965 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CD40LGP29965 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
CD40LGP29965 SRP72P2-201ENST00000344851 1979 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 SAGE4P-201ENST00000442271 3381 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CD40LGP29965 MAPK10-362ENST00000641864 4484 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD40LGP29965 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.27□□□□□ -1.89
CD40LGP29965 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.27□□□□□ -1.89
CD40LGP29965 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD40LGP29965 RNU6-891P-201ENST00000384280 111 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 CASKP1-201ENST00000412870 582 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.27□□□□□ -1.89
CD40LGP29965 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.27□□□□□ -1.89
CD40LGP29965 MTCO3P4-201ENST00000419236 787 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AC023128.2-201ENST00000420880 1223 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 AC016712.1-201ENST00000431088 378 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 BTF3P10-201ENST00000433415 495 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 FTH1P1-201ENST00000437933 532 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.27□□□□□ -1.89
CD40LGP29965 snoU13.7-201ENST00000459220 104 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 RN7SL604P-201ENST00000492589 296 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.27□□□□□ -1.89
CD40LGP29965 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.27□□□□□ -1.89
CD40LGP29965 SNORA64.4-201ENST00000516632 81 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 MRPL49P2-201ENST00000521066 465 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 AP006245.1-201ENST00000522549 120 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.27□□□□□ -1.89
CD40LGP29965 OR4R3P-201ENST00000525084 838 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AP000926.4-201ENST00000527351 454 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 PARP1P2-201ENST00000556806 195 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.27□□□□□ -1.89
CD40LGP29965 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD40LGP29965 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.27□□□□□ -1.89
CD40LGP29965 MIR3939-201ENST00000582614 106 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 AL365400.2-201ENST00000605604 902 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 SNORA51-201ENST00000606420 132 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40LGP29965 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CD40LGP29965 AC079684.1-201ENST00000621405 437 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 MIR6830-201ENST00000636015 70 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.27□□□□□ -1.89
CD40LGP29965 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.27□□□□□ -1.89
CD40LGP29965 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.27□□□□□ -1.89
CD40LGP29965 AL079305.1-201ENST00000623159 3008 ntBASIC3.27□□□□□ -1.89
CD40LGP29965 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD40LGP29965 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CD40LGP29965 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CD40LGP29965 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.26□□□□□ -1.89
CD40LGP29965 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CD40LGP29965 AC007823.1-201ENST00000569932 1566 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms