Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.26□□□□□ -1.41
LMNB1P20700 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LMNB1P20700 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.26□□□□□ -1.41
LMNB1P20700 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.26□□□□□ -1.41
LMNB1P20700 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LMNB1P20700 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.26□□□□□ -1.41
LMNB1P20700 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.26□□□□□ -1.41
LMNB1P20700 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.26□□□□□ -1.41
LMNB1P20700 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.26□□□□□ -1.41
LMNB1P20700 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
LMNB1P20700 DHX40P1-201ENST00000588725 1412 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 OR4G11P-202ENST00000642116 1414 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
LMNB1P20700 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.25□□□□□ -1.41
LMNB1P20700 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LMNB1P20700 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LMNB1P20700 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
LMNB1P20700 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
LMNB1P20700 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LMNB1P20700 RNU6-251P-201ENST00000363235 104 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 SNORD56.6-201ENST00000384569 71 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 MIR506-201ENST00000384998 124 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
LMNB1P20700 U3.22-201ENST00000391120 215 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 FGF7P8-201ENST00000402994 292 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 AC138393.2-201ENST00000414742 246 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.25□□□□□ -1.41
LMNB1P20700 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.25□□□□□ -1.41
LMNB1P20700 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.25□□□□□ -1.41
LMNB1P20700 RPS24P8-201ENST00000431490 402 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.25□□□□□ -1.41
LMNB1P20700 AL450263.2-201ENST00000439400 589 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.25□□□□□ -1.41
LMNB1P20700 RPL39P6-201ENST00000448289 150 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 HMGB1P4-201ENST00000455362 567 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.25□□□□□ -1.41
LMNB1P20700 AMD1P1-201ENST00000457220 922 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 RPL23AP12-201ENST00000467573 473 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.25□□□□□ -1.41
LMNB1P20700 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.25□□□□□ -1.41
LMNB1P20700 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.25□□□□□ -1.41
LMNB1P20700 AC083829.1-201ENST00000503756 657 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
LMNB1P20700 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.25□□□□□ -1.41
LMNB1P20700 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
LMNB1P20700 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.25□□□□□ -1.41
LMNB1P20700 AC026402.1-201ENST00000513642 170 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 SNORA70.11-201ENST00000515987 138 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 SNORA70.13-201ENST00000516116 138 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 RNU6-150P-201ENST00000516237 95 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.25□□□□□ -1.41
LMNB1P20700 AC013828.2-201ENST00000532487 235 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 AK6P1-201ENST00000540219 478 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.25□□□□□ -1.41
LMNB1P20700 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.25□□□□□ -1.41
LMNB1P20700 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.25□□□□□ -1.41
LMNB1P20700 AC008814.1-201ENST00000603797 406 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 AC097468.3-201ENST00000607956 456 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 AC136475.10-201ENST00000620253 385 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 AP003400.3-201ENST00000624904 346 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 MIR6863-201ENST00000636112 90 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 MTND4P29-201ENST00000503122 1372 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.25□□□□□ -1.41
LMNB1P20700 AC015799.1-201ENST00000622996 3122 ntBASIC6.25□□□□□ -1.41
LMNB1P20700 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LMNB1P20700 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LMNB1P20700 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LMNB1P20700 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LMNB1P20700 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 AC079097.1-201ENST00000512187 1399 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 OR4K15-201ENST00000305051 1216 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 AL590002.1-201ENST00000406554 418 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 OR10T1P-201ENST00000424327 947 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.24□□□□□ -1.41
LMNB1P20700 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 AC112653.1-201ENST00000443851 386 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 RPS15AP1-201ENST00000457423 391 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 MEMO1P3-201ENST00000459811 302 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms