Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.6□□□□□ -1.83
SDC1P18827 AC090071.1-201ENST00000507713 644 ntBASIC3.6□□□□□ -1.83
SDC1P18827 AC110792.2-201ENST00000510278 224 ntBASIC3.6□□□□□ -1.83
SDC1P18827 OR5H4P-201ENST00000510851 923 ntBASIC3.6□□□□□ -1.83
SDC1P18827 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SDC1P18827 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.6□□□□□ -1.83
SDC1P18827 RNU6-416P-201ENST00000516265 103 ntBASIC3.6□□□□□ -1.83
SDC1P18827 AC022695.1-201ENST00000522089 237 ntBASIC3.6□□□□□ -1.83
SDC1P18827 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.6□□□□□ -1.83
SDC1P18827 HMGB1P1-201ENST00000522557 636 ntBASIC3.6□□□□□ -1.83
SDC1P18827 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.6□□□□□ -1.83
SDC1P18827 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.6□□□□□ -1.83
SDC1P18827 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.6□□□□□ -1.83
SDC1P18827 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.6□□□□□ -1.83
SDC1P18827 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.6□□□□□ -1.83
SDC1P18827 MTCO1P40-201ENST00000574371 625 ntBASIC3.6□□□□□ -1.83
SDC1P18827 MIR4700-201ENST00000578311 74 ntBASIC3.6□□□□□ -1.83
SDC1P18827 AC008507.2-201ENST00000588402 1176 ntBASIC3.6□□□□□ -1.83
SDC1P18827 AC006116.7-201ENST00000590141 756 ntBASIC3.6□□□□□ -1.83
SDC1P18827 AC067852.4-201ENST00000590314 478 ntBASIC3.6□□□□□ -1.83
SDC1P18827 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.6□□□□□ -1.83
SDC1P18827 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.6□□□□□ -1.83
SDC1P18827 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.6□□□□□ -1.83
SDC1P18827 AL354760.1-201ENST00000608357 643 ntBASIC3.6□□□□□ -1.83
SDC1P18827 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.6□□□□□ -1.83
SDC1P18827 AL121594.5-201ENST00000631724 573 ntBASIC3.6□□□□□ -1.83
SDC1P18827 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.6□□□□□ -1.83
SDC1P18827 OR6C71P-202ENST00000641886 1107 ntBASIC3.6□□□□□ -1.83
SDC1P18827 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.6□□□□□ -1.83
SDC1P18827 AL139811.1-201ENST00000424779 2299 ntBASIC3.6□□□□□ -1.83
SDC1P18827 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SDC1P18827 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.6□□□□□ -1.83
SDC1P18827 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.6□□□□□ -1.83
SDC1P18827 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
SDC1P18827 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.6□□□□□ -1.83
SDC1P18827 SAGE2P-201ENST00000420011 2126 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC1P18827 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC1P18827 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDC1P18827 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDC1P18827 RPL32P3-201ENST00000359025 275 ntBASIC3.59□□□□□ -1.83
SDC1P18827 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC1P18827 AC234772.1-201ENST00000377927 937 ntBASIC3.59□□□□□ -1.83
SDC1P18827 RNU1-13P-201ENST00000384499 162 ntBASIC3.59□□□□□ -1.83
SDC1P18827 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC1P18827 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
SDC1P18827 AC092638.1-201ENST00000411966 1275 ntBASIC3.59□□□□□ -1.83
SDC1P18827 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC1P18827 AC016769.2-201ENST00000414815 475 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.59□□□□□ -1.83
SDC1P18827 TAF13P2-201ENST00000416876 286 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.59□□□□□ -1.83
SDC1P18827 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC1P18827 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC1P18827 RPL21P110-201ENST00000433345 446 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC1P18827 AC004865.1-201ENST00000442276 1003 ntBASIC3.59□□□□□ -1.83
SDC1P18827 SEPT14P24-201ENST00000447236 180 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AL162151.2-201ENST00000448875 158 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AC233982.1-201ENST00000451247 436 ntBASIC3.59□□□□□ -1.83
SDC1P18827 MTCO3P16-201ENST00000454456 754 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.59□□□□□ -1.83
SDC1P18827 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SDC1P18827 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.59□□□□□ -1.83
SDC1P18827 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC1P18827 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC1P18827 RNU6-352P-201ENST00000516908 107 ntBASIC3.59□□□□□ -1.83
SDC1P18827 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.59□□□□□ -1.83
SDC1P18827 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.59□□□□□ -1.83
SDC1P18827 AC124293.1-201ENST00000530034 493 ntBASIC3.59□□□□□ -1.83
SDC1P18827 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.59□□□□□ -1.83
SDC1P18827 AC087894.1-201ENST00000538359 518 ntBASIC3.59□□□□□ -1.83
SDC1P18827 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDC1P18827 CYB5AP5-201ENST00000549779 389 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC1P18827 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.59□□□□□ -1.83
SDC1P18827 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.59□□□□□ -1.83
SDC1P18827 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC1P18827 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC1P18827 AC011492.1-201ENST00000600023 315 ntBASIC3.59□□□□□ -1.83
SDC1P18827 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC1P18827 AC091488.1-201ENST00000604239 660 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AC099785.1-201ENST00000605697 437 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AC113194.1-201ENST00000606037 500 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AL133445.2-201ENST00000611191 527 ntBASIC3.59□□□□□ -1.83
SDC1P18827 AC023043.4-201ENST00000612081 449 ntBASIC3.59□□□□□ -1.83
SDC1P18827 uc_338.32-201ENST00000615087 172 ntBASIC3.59□□□□□ -1.83
SDC1P18827 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SDC1P18827 AL356118.1-201ENST00000635272 1078 ntBASIC3.59□□□□□ -1.83
SDC1P18827 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SDC1P18827 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC1P18827 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDC1P18827 MTND4P8-201ENST00000514997 1362 ntBASIC3.59□□□□□ -1.83
SDC1P18827 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SDC1P18827 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SDC1P18827 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.59□□□□□ -1.84
SDC1P18827 AC095050.2-201ENST00000510748 1458 ntBASIC3.59□□□□□ -1.84
SDC1P18827 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.59□□□□□ -1.84
SDC1P18827 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SDC1P18827 MAPK10-372ENST00000641954 3413 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms