Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 SAGE4P-201ENST00000442271 3381 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
PDGFRAP16234 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 RLIMP1-201ENST00000339626 1680 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 AC016588.2-201ENST00000632484 3021 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.23□□□□□ -1.73
PDGFRAP16234 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 RNU6-1000P-201ENST00000391066 106 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 MTCO2P31-201ENST00000402702 684 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 RPL21P65-201ENST00000406094 466 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 AL355143.1-201ENST00000407101 841 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 SNORA3C-201ENST00000408792 125 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 AC096533.1-201ENST00000411645 353 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 TPT1P2-201ENST00000413105 503 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 LIPT1P1-201ENST00000415870 1186 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.23□□□□□ -1.73
PDGFRAP16234 OR5BE1P-201ENST00000425977 939 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 OR4F13P-201ENST00000428478 931 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 AC012497.1-201ENST00000429392 575 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.23□□□□□ -1.73
PDGFRAP16234 MTCYBP15-201ENST00000433123 1127 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 HSFY6P-201ENST00000445573 403 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.23□□□□□ -1.73
PDGFRAP16234 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.23□□□□□ -1.73
PDGFRAP16234 RPL23AP2-201ENST00000471227 466 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 AC118282.2-201ENST00000508739 374 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.23□□□□□ -1.73
PDGFRAP16234 RNU6-202P-201ENST00000515998 96 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.23□□□□□ -1.73
PDGFRAP16234 EIF5A2P1-201ENST00000564027 460 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 AC022968.1-201ENST00000567372 442 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.23□□□□□ -1.73
PDGFRAP16234 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.23□□□□□ -1.73
PDGFRAP16234 RNU6-1192P-201ENST00000612197 107 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 RNU6-489P-201ENST00000618289 107 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 OR5BE1P-202ENST00000641168 1176 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDGFRAP16234 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.23□□□□□ -1.73
PDGFRAP16234 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFRAP16234 MTND5P28-201ENST00000438005 1594 ntBASIC4.23□□□□□ -1.73
PDGFRAP16234 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFRAP16234 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PDGFRAP16234 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PDGFRAP16234 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PDGFRAP16234 OR1L1-202ENST00000373686 1083 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 RPL7P27-201ENST00000403775 720 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 RPL31P45-201ENST00000419532 356 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 RPS15AP40-201ENST00000419621 391 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFRAP16234 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.22□□□□□ -1.73
PDGFRAP16234 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFRAP16234 AL117339.2-201ENST00000430475 180 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFRAP16234 AC010881.1-201ENST00000433830 235 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 VN1R25P-201ENST00000443385 738 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFRAP16234 VN1R40P-201ENST00000455196 941 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 RPS15AP1-201ENST00000457423 391 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.22□□□□□ -1.73
PDGFRAP16234 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFRAP16234 AL132838.2-201ENST00000492041 314 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 RPS6P4-201ENST00000494693 758 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFRAP16234 SNX5P1-201ENST00000505757 1041 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 Vault.1-201ENST00000516474 102 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 RNA5SP309-201ENST00000516670 106 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 RN7SKP234-201ENST00000517173 224 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.22□□□□□ -1.73
PDGFRAP16234 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.22□□□□□ -1.73
PDGFRAP16234 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.22□□□□□ -1.73
PDGFRAP16234 AC084824.1-201ENST00000550917 1005 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 AGGF1P6-201ENST00000569213 976 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFRAP16234 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.22□□□□□ -1.73
PDGFRAP16234 BNIP3P27-201ENST00000599991 412 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 AL049634.3-201ENST00000604968 457 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.22□□□□□ -1.73
PDGFRAP16234 AP000255.1-201ENST00000610276 676 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 MIR6868-201ENST00000611215 58 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 AC105227.2-201ENST00000615075 605 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 VN1R7P-201ENST00000619242 903 ntBASIC4.22□□□□□ -1.73
PDGFRAP16234 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PDGFRAP16234 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PDGFRAP16234 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFRAP16234 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFRAP16234 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFRAP16234 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDGFRAP16234 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PDGFRAP16234 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.21□□□□□ -1.73
PDGFRAP16234 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms