Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TOP2AP11388 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC5.38□□□□□ -1.55
TOP2AP11388 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TOP2AP11388 AL353692.2-201ENST00000407054 335 ntBASIC5.38□□□□□ -1.55
TOP2AP11388 RNA5SP31-201ENST00000411144 127 ntBASIC5.38□□□□□ -1.55
TOP2AP11388 RANP4-201ENST00000413361 655 ntBASIC5.38□□□□□ -1.55
TOP2AP11388 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.38□□□□□ -1.55
TOP2AP11388 ARL2BPP6-201ENST00000512757 439 ntBASIC5.38□□□□□ -1.55
TOP2AP11388 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TOP2AP11388 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
TOP2AP11388 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
TOP2AP11388 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TOP2AP11388 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TOP2AP11388 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC5.37□□□□□ -1.55
TOP2AP11388 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TOP2AP11388 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
TOP2AP11388 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TOP2AP11388 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TOP2AP11388 AL645937.1-202ENST00000421799 937 ntBASIC5.37□□□□□ -1.55
TOP2AP11388 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.37□□□□□ -1.55
TOP2AP11388 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TOP2AP11388 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.37□□□□□ -1.55
TOP2AP11388 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.37□□□□□ -1.55
TOP2AP11388 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
TOP2AP11388 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.36□□□□□ -1.55
TOP2AP11388 U3.12-201ENST00000364498 214 ntBASIC5.36□□□□□ -1.55
TOP2AP11388 SNORD15B-201ENST00000384714 146 ntBASIC5.36□□□□□ -1.55
TOP2AP11388 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.36□□□□□ -1.55
TOP2AP11388 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.36□□□□□ -1.55
TOP2AP11388 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.36□□□□□ -1.55
TOP2AP11388 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.36□□□□□ -1.55
TOP2AP11388 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TOP2AP11388 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TOP2AP11388 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TOP2AP11388 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
TOP2AP11388 RNA5SP184-201ENST00000411071 108 ntBASIC5.35□□□□□ -1.55
TOP2AP11388 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.35□□□□□ -1.55
TOP2AP11388 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.35□□□□□ -1.55
TOP2AP11388 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.35□□□□□ -1.55
TOP2AP11388 HMGB1P3-201ENST00000502802 616 ntBASIC5.35□□□□□ -1.55
TOP2AP11388 AL512310.1-201ENST00000548639 172 ntBASIC5.35□□□□□ -1.55
TOP2AP11388 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.35□□□□□ -1.55
TOP2AP11388 AC024153.1-201ENST00000603103 365 ntBASIC5.35□□□□□ -1.55
TOP2AP11388 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.35□□□□□ -1.55
TOP2AP11388 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TOP2AP11388 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.35□□□□□ -1.55
TOP2AP11388 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TOP2AP11388 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC5.35□□□□□ -1.55
TOP2AP11388 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TOP2AP11388 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
TOP2AP11388 XGY1-201ENST00000381172 446 ntBASIC5.34□□□□□ -1.55
TOP2AP11388 RNU6-55P-201ENST00000411092 107 ntBASIC5.34□□□□□ -1.55
TOP2AP11388 RNU6-954P-201ENST00000411355 107 ntBASIC5.34□□□□□ -1.55
TOP2AP11388 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.34□□□□□ -1.55
TOP2AP11388 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.34□□□□□ -1.55
TOP2AP11388 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.34□□□□□ -1.55
TOP2AP11388 AC108938.1-201ENST00000451204 136 ntBASIC5.34□□□□□ -1.55
TOP2AP11388 HMGN2P7-201ENST00000456186 273 ntBASIC5.34□□□□□ -1.55
TOP2AP11388 PRDX3P4-201ENST00000470828 747 ntBASIC5.34□□□□□ -1.55
TOP2AP11388 RNA5SP367-201ENST00000516557 118 ntBASIC5.34□□□□□ -1.55
TOP2AP11388 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.34□□□□□ -1.55
TOP2AP11388 AC139713.2-210ENST00000641741 992 ntBASIC5.34□□□□□ -1.55
TOP2AP11388 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC5.34□□□□□ -1.55
TOP2AP11388 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
TOP2AP11388 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TOP2AP11388 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
TOP2AP11388 FTLP6-201ENST00000355274 422 ntBASIC5.33□□□□□ -1.56
TOP2AP11388 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.33□□□□□ -1.56
TOP2AP11388 AC083906.5-201ENST00000503722 328 ntBASIC5.33□□□□□ -1.56
TOP2AP11388 AC079600.2-201ENST00000550076 130 ntBASIC5.33□□□□□ -1.56
TOP2AP11388 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.33□□□□□ -1.56
TOP2AP11388 AL365400.2-201ENST00000605604 902 ntBASIC5.33□□□□□ -1.56
TOP2AP11388 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOP2AP11388 MTCO1P24-201ENST00000515438 1558 ntBASIC5.33□□□□□ -1.56
TOP2AP11388 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOP2AP11388 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOP2AP11388 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOP2AP11388 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TOP2AP11388 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.33□□□□□ -1.56
TOP2AP11388 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TOP2AP11388 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOP2AP11388 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOP2AP11388 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOP2AP11388 GLRXP1-201ENST00000423261 334 ntBASIC5.33□□□□□ -1.56
TOP2AP11388 HMGB3P11-201ENST00000440127 604 ntBASIC5.33□□□□□ -1.56
TOP2AP11388 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.33□□□□□ -1.56
TOP2AP11388 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.33□□□□□ -1.56
TOP2AP11388 CYCSP39-201ENST00000565821 309 ntBASIC5.33□□□□□ -1.56
TOP2AP11388 DPRXP4-201ENST00000578053 568 ntBASIC5.33□□□□□ -1.56
TOP2AP11388 MIR3945-201ENST00000581853 98 ntBASIC5.33□□□□□ -1.56
TOP2AP11388 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.33□□□□□ -1.56
TOP2AP11388 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TOP2AP11388 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TOP2AP11388 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TOP2AP11388 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
TOP2AP11388 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TOP2AP11388 AC092111.2-201ENST00000611627 1414 ntBASIC5.32□□□□□ -1.56
TOP2AP11388 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TOP2AP11388 ARF4P3-201ENST00000397387 509 ntBASIC5.32□□□□□ -1.56
TOP2AP11388 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms