Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFAP04085 AL445437.1-201ENST00000623157 3087 ntBASIC5.87□□□□□ -1.47
PDGFAP04085 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFAP04085 AC093671.1-201ENST00000624981 2929 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PDGFAP04085 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFAP04085 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 AC025809.2-201ENST00000625085 1802 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFAP04085 TAB3P1-202ENST00000452645 1634 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 SAGE3P-201ENST00000619800 1635 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AP002512.4-202ENST00000641599 4530 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 MTND4P14-201ENST00000435799 1354 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 RNU6-511P-201ENST00000363496 107 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 Y_RNA.145-201ENST00000363527 102 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 Y_RNA.414-201ENST00000384011 101 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 RNU6-1029P-201ENST00000384109 107 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PDGFAP04085 RPL5P18-201ENST00000406671 891 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 RNU2-21P-201ENST00000410368 188 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AL713922.1-201ENST00000416477 747 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFAP04085 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFAP04085 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFAP04085 CYCSP12-201ENST00000437729 300 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 SPRYD7P1-201ENST00000443861 570 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFAP04085 AL353691.1-201ENST00000451332 387 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 RPL10P17-201ENST00000453852 316 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AC022034.3-201ENST00000471393 478 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AC007998.1-201ENST00000474156 672 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFAP04085 RPS27AP18-201ENST00000515536 459 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 RN7SKP99-201ENST00000517028 307 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 Y_RNA.718-201ENST00000517110 102 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFAP04085 AC078899.1-201ENST00000521432 1185 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFAP04085 AP000857.1-201ENST00000532151 543 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AC027544.3-201ENST00000535082 757 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.86□□□□□ -1.47
PDGFAP04085 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.86□□□□□ -1.47
PDGFAP04085 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.86□□□□□ -1.47
PDGFAP04085 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.86□□□□□ -1.47
PDGFAP04085 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFAP04085 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 AC110743.1-201ENST00000584870 478 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 DPPA3P3-201ENST00000603842 430 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 AC008555.7-201ENST00000605008 583 ntBASIC5.86□□□□□ -1.47
PDGFAP04085 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFAP04085 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFAP04085 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFAP04085 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PDGFAP04085 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PDGFAP04085 AL731556.1-201ENST00000394628 3711 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PDGFAP04085 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFAP04085 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
PDGFAP04085 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PDGFAP04085 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFAP04085 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFAP04085 RNA5SP477-201ENST00000362639 119 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 U3.12-201ENST00000364498 214 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 Y_RNA.301-201ENST00000364990 103 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 SNORA33.2-201ENST00000365413 134 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 RNU1-74P-201ENST00000384108 171 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFAP04085 SNRPEP6-201ENST00000407465 277 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 RNU6-603P-201ENST00000411403 107 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 AC016769.2-201ENST00000414815 475 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFAP04085 AC099336.2-201ENST00000422457 254 ntBASIC5.85□□□□□ -1.47
PDGFAP04085 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFAP04085 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFAP04085 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFAP04085 AC099560.2-201ENST00000457554 255 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms