Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNA5SP509-201ENST00000364577 119 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 SNORA73.2-201ENST00000364946 201 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 SNORD65C-201ENST00000390962 71 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 RPL23AP38-201ENST00000423801 469 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AL732292.1-201ENST00000426692 226 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC006994.1-201ENST00000438212 839 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC092170.1-201ENST00000440211 356 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 RANP8-201ENST00000444720 713 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 MOB1AP2-201ENST00000446060 614 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 MTND1P33-201ENST00000446251 917 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AL096803.2-201ENST00000450032 677 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 RPL23AP15-201ENST00000450202 459 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 RPL38P1-201ENST00000460914 211 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC015724.1-201ENST00000478577 156 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC112518.2-201ENST00000508565 425 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC110768.1-201ENST00000509222 400 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC005351.1-201ENST00000511152 786 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 RN7SKP289-201ENST00000517244 295 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC010476.1-201ENST00000519111 851 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC113192.3-201ENST00000529152 742 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC095057.3-201ENST00000567102 1157 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC008687.2-201ENST00000597865 520 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC068790.4-201ENST00000602474 263 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 BNIP3P4-201ENST00000604946 565 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AL136295.6-201ENST00000610486 658 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AC092608.3-201ENST00000625017 386 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 AL356118.1-201ENST00000635272 1078 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 DCAF13P1-201ENST00000495256 1330 ntBASIC2.85□□□□□ -1.95
HLA-DQA1P01909 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
HLA-DQA1P01909 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 MIR383-201ENST00000362257 73 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 U3.15-201ENST00000365398 212 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 SNORD6-201ENST00000365444 73 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AP002088.1-201ENST00000382740 395 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 MIR153-1-201ENST00000384914 90 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 RNU6-328P-201ENST00000390887 106 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 RNU4-25P-201ENST00000410569 230 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AC016397.1-201ENST00000412463 242 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 PTP4A1P5-201ENST00000420305 455 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 RPS29P17-201ENST00000430795 166 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 BX679664.1-201ENST00000434429 253 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AC073143.1-201ENST00000436316 395 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 RAB11AP1-201ENST00000442978 646 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 GXYLT1P1-201ENST00000446657 490 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AL049830.2-201ENST00000480072 201 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 RPL35P6-201ENST00000490024 372 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 MTCO2P9-201ENST00000503214 694 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 AC008885.2-201ENST00000509506 930 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DQA1P01909 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 RN7SKP96-201ENST00000516948 297 ntBASIC2.84□□□□□ -1.95
HLA-DQA1P01909 IGKV2-23-201ENST00000518729 323 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms