Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK2O00526 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK2O00526 AL590399.6-201ENST00000446396 307 ntBASIC2.92□□□□□ -1.94
UPK2O00526 MRPL35P4-201ENST00000453682 566 ntBASIC2.92□□□□□ -1.94
UPK2O00526 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK2O00526 CEACAMP4-201ENST00000457676 421 ntBASIC2.92□□□□□ -1.94
UPK2O00526 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.92□□□□□ -1.94
UPK2O00526 RPL23AP55-201ENST00000498163 452 ntBASIC2.92□□□□□ -1.94
UPK2O00526 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK2O00526 AC026784.1-201ENST00000507986 352 ntBASIC2.92□□□□□ -1.94
UPK2O00526 NDUFB4P9-201ENST00000511646 388 ntBASIC2.92□□□□□ -1.94
UPK2O00526 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.92□□□□□ -1.94
UPK2O00526 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK2O00526 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.92□□□□□ -1.94
UPK2O00526 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.92□□□□□ -1.94
UPK2O00526 AL442163.2-201ENST00000553912 710 ntBASIC2.92□□□□□ -1.94
UPK2O00526 AGGF1P6-201ENST00000569213 976 ntBASIC2.92□□□□□ -1.94
UPK2O00526 MIR4700-201ENST00000578311 74 ntBASIC2.92□□□□□ -1.94
UPK2O00526 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
UPK2O00526 AC006077.1-201ENST00000604746 343 ntBASIC2.92□□□□□ -1.94
UPK2O00526 RNVU1-4-201ENST00000612985 164 ntBASIC2.92□□□□□ -1.94
UPK2O00526 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
UPK2O00526 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
UPK2O00526 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
UPK2O00526 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.92□□□□□ -1.94
UPK2O00526 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.92□□□□□ -1.94
UPK2O00526 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.92□□□□□ -1.94
UPK2O00526 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.92□□□□□ -1.94
UPK2O00526 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
UPK2O00526 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
UPK2O00526 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
UPK2O00526 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.92□□□□□ -1.94
UPK2O00526 XPOTP1-201ENST00000443317 2398 ntBASIC2.92□□□□□ -1.94
UPK2O00526 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
UPK2O00526 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
UPK2O00526 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
UPK2O00526 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
UPK2O00526 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
UPK2O00526 AL136116.1-201ENST00000403591 381 ntBASIC2.91□□□□□ -1.94
UPK2O00526 HSPE1P26-201ENST00000405341 275 ntBASIC2.91□□□□□ -1.94
UPK2O00526 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
UPK2O00526 MTND2P16-201ENST00000419987 799 ntBASIC2.91□□□□□ -1.94
UPK2O00526 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 AC017083.1-201ENST00000428093 483 ntBASIC2.91□□□□□ -1.94
UPK2O00526 HMGB1P45-201ENST00000435986 653 ntBASIC2.91□□□□□ -1.94
UPK2O00526 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 Z77249.1-201ENST00000444622 1175 ntBASIC2.91□□□□□ -1.94
UPK2O00526 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.91□□□□□ -1.94
UPK2O00526 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 AC239367.2-201ENST00000447309 705 ntBASIC2.91□□□□□ -1.94
UPK2O00526 RPL23AP15-201ENST00000450202 459 ntBASIC2.91□□□□□ -1.94
UPK2O00526 RPL23AP62-201ENST00000463396 453 ntBASIC2.91□□□□□ -1.94
UPK2O00526 ACTG1P13-201ENST00000486987 1043 ntBASIC2.91□□□□□ -1.94
UPK2O00526 UBE2CP3-201ENST00000502715 450 ntBASIC2.91□□□□□ -1.94
UPK2O00526 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.91□□□□□ -1.94
UPK2O00526 RN7SKP244-201ENST00000516513 307 ntBASIC2.91□□□□□ -1.94
UPK2O00526 RNU6-579P-201ENST00000516879 102 ntBASIC2.91□□□□□ -1.94
UPK2O00526 MIR2116-201ENST00000517221 80 ntBASIC2.91□□□□□ -1.94
UPK2O00526 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.91□□□□□ -1.94
UPK2O00526 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 AC104115.2-201ENST00000523026 687 ntBASIC2.91□□□□□ -1.94
UPK2O00526 MTND5P21-201ENST00000531961 522 ntBASIC2.91□□□□□ -1.94
UPK2O00526 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
UPK2O00526 AP003717.3-201ENST00000544832 1180 ntBASIC2.91□□□□□ -1.94
UPK2O00526 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.91□□□□□ -1.94
UPK2O00526 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.91□□□□□ -1.94
UPK2O00526 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.91□□□□□ -1.94
UPK2O00526 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 MIR5187-201ENST00000583479 76 ntBASIC2.91□□□□□ -1.94
UPK2O00526 AL590392.1-201ENST00000604960 446 ntBASIC2.91□□□□□ -1.94
UPK2O00526 RNU1-30P-201ENST00000606575 163 ntBASIC2.91□□□□□ -1.94
UPK2O00526 AL391261.4-201ENST00000616012 481 ntBASIC2.91□□□□□ -1.94
UPK2O00526 AC025016.1-201ENST00000616746 682 ntBASIC2.91□□□□□ -1.94
UPK2O00526 MIR6875-201ENST00000617506 72 ntBASIC2.91□□□□□ -1.94
UPK2O00526 AC022079.2-201ENST00000619739 566 ntBASIC2.91□□□□□ -1.94
UPK2O00526 U7.8-201ENST00000619968 63 ntBASIC2.91□□□□□ -1.94
UPK2O00526 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.91□□□□□ -1.94
UPK2O00526 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.91□□□□□ -1.94
UPK2O00526 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.91□□□□□ -1.94
UPK2O00526 RNA5SP196-201ENST00000625967 102 ntBASIC2.91□□□□□ -1.94
UPK2O00526 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
UPK2O00526 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
UPK2O00526 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
UPK2O00526 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
UPK2O00526 AC104446.1-201ENST00000613728 1321 ntBASIC2.91□□□□□ -1.94
UPK2O00526 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.9□□□□□ -1.94
UPK2O00526 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
UPK2O00526 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
UPK2O00526 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
UPK2O00526 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
UPK2O00526 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
UPK2O00526 RNU6-600P-201ENST00000362524 99 ntBASIC2.9□□□□□ -1.95
UPK2O00526 SNORA31-201ENST00000362607 130 ntBASIC2.9□□□□□ -1.95
UPK2O00526 AL353692.2-201ENST00000407054 335 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms