Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.29□□□□□ -1.72
CGB1A6NKQ9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 ZNF37BP-203ENST00000452306 1352 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 TCP11X1-202ENST00000622971 1372 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 Y_RNA.97-201ENST00000363094 102 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 RNA5SP391-201ENST00000363456 119 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 RNU6-877P-201ENST00000383868 107 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 RNU4-55P-201ENST00000410731 137 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 RPS3AP3-201ENST00000411933 242 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 TMBIM7P-201ENST00000418074 855 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC083875.1-201ENST00000419509 405 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 FABP7P1-201ENST00000424004 391 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 MTCO1P20-201ENST00000425366 358 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 MTND6P12-201ENST00000428247 522 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 RPL19P16-201ENST00000433839 588 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AL451074.3-201ENST00000437709 472 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC002504.1-201ENST00000438281 691 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 RPL23AP15-201ENST00000450202 459 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 CBX1P2-201ENST00000453841 458 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 BX322784.1-201ENST00000455793 1077 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC092757.1-201ENST00000467293 467 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC092754.1-201ENST00000472975 479 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AP000797.2-201ENST00000475768 606 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC058823.1-201ENST00000485315 474 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC021678.1-201ENST00000505195 936 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC117522.3-201ENST00000507974 584 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC016559.2-201ENST00000510759 359 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC105914.1-201ENST00000511798 226 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 RNU6-1261P-201ENST00000517194 104 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 FTH1P11-201ENST00000517577 551 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 OR5M2P-201ENST00000529003 936 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC022878.1-201ENST00000530684 149 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AP004607.2-201ENST00000533949 322 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AL049872.1-201ENST00000556323 322 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 TRAV15-201ENST00000556680 249 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 RN7SL356P-201ENST00000582228 248 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC006363.1-201ENST00000603806 463 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC115286.1-201ENST00000604298 434 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AL139286.1-201ENST00000604465 483 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AL445264.1-201ENST00000621719 171 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC010338.1-201ENST00000621823 717 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC132068.1-201ENST00000623805 459 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC092376.2-201ENST00000622621 4116 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CGB1A6NKQ9 AC006026.1-201ENST00000444025 1803 ntBASIC4.28□□□□□ -1.72
CGB1A6NKQ9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.27□□□□□ -1.73
CGB1A6NKQ9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms