Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC002524.1-201ENST00000411687 547 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AL031736.2-201ENST00000426573 787 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 MTND2P20-201ENST00000440805 661 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC073648.4-201ENST00000442655 781 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 RPL7AP28-201ENST00000464513 571 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 RPL21P126-201ENST00000470049 478 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 SETP14-201ENST00000497538 873 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 RNU6-678P-201ENST00000516832 109 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AL352979.3-201ENST00000553515 247 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC018552.3-201ENST00000567416 561 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 CYP4A43P-201ENST00000568156 121 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 MIR4480-201ENST00000582492 71 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 VN1R92P-201ENST00000598511 928 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AP000811.1-201ENST00000603803 651 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC245297.2-201ENST00000610119 565 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 MIR7703-201ENST00000620784 77 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC016588.2-201ENST00000632484 3021 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC083843.2-201ENST00000568248 6253 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 NOL8P1-201ENST00000508336 3529 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 MIR513A2-201ENST00000385249 127 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 MIR3065-201ENST00000390137 79 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 MIR550A3-201ENST00000390735 95 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 FABP12P1-201ENST00000401911 322 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 NCSTNP1-201ENST00000406229 144 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 HNRNPDP2-201ENST00000406475 478 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 RN7SKP182-201ENST00000410772 298 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 PIGPP2-201ENST00000411569 458 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 TMSB10P2-201ENST00000416049 131 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 RPS23P10-201ENST00000416185 486 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 UQCRBP1-201ENST00000421129 336 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 RPS26P47-201ENST00000427219 348 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 ELOCP8-201ENST00000439309 332 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 ELOCP15-201ENST00000442090 332 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 MTND2P28-201ENST00000457540 1044 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AP000893.1-201ENST00000474462 794 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC108145.1-201ENST00000503770 153 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 HMGB1P28-201ENST00000507778 552 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 IGKV1-32-201ENST00000519290 311 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 MTCO1P49-201ENST00000523429 802 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AP000790.1-201ENST00000528891 737 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC084783.1-201ENST00000565846 910 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 MIR4270-201ENST00000581799 70 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC110743.1-201ENST00000584870 478 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC008782.1-201ENST00000603386 430 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 LINC01109-201ENST00000603837 3081 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC079587.1-201ENST00000603846 277 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC115286.1-201ENST00000604298 434 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AL451064.1-201ENST00000607718 471 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC011939.3-201ENST00000613686 466 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms