Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 OTUD4P1-201ENST00000237841 3067 ntBASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMIM28A0A1B0GU29 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 OR6K3-202ENST00000368146 996 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 PTMAP5-201ENST00000393073 333 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 HSPD1P16-201ENST00000402302 394 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 PTGES3P2-201ENST00000407942 482 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 RNU2-17P-201ENST00000410290 190 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AL512661.1-201ENST00000434586 1253 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AC239809.1-201ENST00000450470 217 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 SNORD116-26-201ENST00000516006 96 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AC025918.2-201ENST00000558683 763 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AL360157.1-201ENST00000565962 87 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AC011374.2-201ENST00000607135 526 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AC097460.3-201ENST00000623099 442 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AL118496.1-201ENST00000440201 1812 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 AC073073.2-201ENST00000609827 2578 ntBASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMIM28A0A1B0GU29 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 RNU1-33P-201ENST00000364249 162 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 SNORA62.2-201ENST00000364672 152 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 PTP4A1P3-201ENST00000433661 420 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 MRPS18BP2-201ENST00000434310 759 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 RPS4XP10-201ENST00000465034 731 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AC010307.1-201ENST00000467206 836 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 RN7SL594P-201ENST00000470590 287 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 HSPD1P15-201ENST00000505573 1122 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AP000926.4-201ENST00000527351 454 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AC022882.1-201ENST00000532142 501 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 NCAPGP2-201ENST00000557911 754 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AC079148.1-201ENST00000565944 819 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 AL163051.2-201ENST00000618976 735 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 GTF2H2B-203ENST00000508065 1432 ntBASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMIM28A0A1B0GU29 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 Y_RNA.333-201ENST00000365274 102 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 RNU6-650P-201ENST00000365658 111 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 HMGB1P10-201ENST00000395823 563 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 RNU4-27P-201ENST00000410889 139 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC013404.1-201ENST00000413068 249 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 IPMKP1-201ENST00000425988 855 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AC006989.1-201ENST00000427212 131 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 SKP1P1-201ENST00000438081 489 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 RPL34P26-201ENST00000445636 354 ntBASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.76□□□□□ -1.81
SMIM28A0A1B0GU29 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms