Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RN7SL697P-201ENST00000582484 299 ntBASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 AC008521.1-201ENST00000587471 187 ntBASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 AC006363.1-201ENST00000603806 463 ntBASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 AC012443.1-201ENST00000605605 231 ntBASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 AC087894.3-201ENST00000623682 349 ntBASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 MAPK10-270ENST00000641102 3538 ntBASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VPS9D1Q9Y2B5 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AC009643.2-201ENST00000603543 1448 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 OR52B3P-201ENST00000314715 928 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 RNU6-960P-201ENST00000364056 120 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 SNORA70.5-201ENST00000365519 135 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 MIR649-201ENST00000384843 97 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 RPS29P13-201ENST00000402041 169 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AL354766.1-201ENST00000423396 542 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AL645936.2-201ENST00000430565 928 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 MYL6P3-201ENST00000436904 432 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 DBIL5P2-201ENST00000443827 253 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AC091179.1-201ENST00000461606 579 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 RPL9P9-202ENST00000466501 579 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AC026254.2-201ENST00000475295 371 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 LSM6P2-201ENST00000552208 177 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AL591767.3-201ENST00000554632 525 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AC018552.1-201ENST00000562099 811 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 MRPS21P9-201ENST00000571150 257 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 RN7SL199P-201ENST00000578752 281 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 RN7SL656P-201ENST00000579044 281 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 RN7SL404P-201ENST00000582421 281 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AC090774.2-201ENST00000584708 322 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AC092032.1-201ENST00000603090 165 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 RN7SL126P-201ENST00000616400 299 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AL354702.2-202ENST00000641481 890 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 LCOR-201ENST00000286067 4542 ntBASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS9D1Q9Y2B5 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 RNU6-1298P-201ENST00000362456 101 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AL024474.1-201ENST00000404655 591 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.92□□□□□ -1.3
VPS9D1Q9Y2B5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms