Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 RNU6-138P-201ENST00000515952 107 ntBASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 RNU2-53P-201ENST00000516257 147 ntBASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 SNORA40.12-201ENST00000516329 111 ntBASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 OR4T1P-201ENST00000554933 911 ntBASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 AL022345.1-201ENST00000607292 135 ntBASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
PDZRN3Q9UPQ7 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC007342.5-201ENST00000571340 2142 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 Y_RNA.339-201ENST00000365325 102 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 Y_RNA.455-201ENST00000384230 98 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 RNU6-1109P-201ENST00000391187 107 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 SAR1AP2-201ENST00000392696 594 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 EI24P3-201ENST00000399046 1062 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 MIR1252-201ENST00000408861 65 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 HSPE1P1-201ENST00000421494 318 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 OR2AS1P-201ENST00000427827 319 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 HMGB1P9-201ENST00000429856 646 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC073410.1-201ENST00000435125 589 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 GAPDHP58-201ENST00000438477 1006 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC015911.1-201ENST00000495111 156 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 MTCO1P29-201ENST00000496868 288 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC108078.3-201ENST00000502633 489 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC091885.1-201ENST00000506658 268 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC109481.1-201ENST00000509173 282 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 RNU6-976P-201ENST00000516086 111 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 OR5B10P-201ENST00000532869 642 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC113195.1-201ENST00000579952 141 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC005021.1-201ENST00000608730 355 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 FTX_2.1-201ENST00000618816 94 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AL732618.1-201ENST00000623251 301 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 OR5BR1P-201ENST00000524992 1330 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 CDR1-202ENST00000625883 1485 ntBASIC7.49□□□□□ -1.21
PDZRN3Q9UPQ7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RNU6-874P-201ENST00000362390 105 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RNA5SP443-201ENST00000363083 132 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RNA5SP394-201ENST00000364216 119 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RN7SKP124-201ENST00000364730 341 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RNU6-1158P-201ENST00000391167 107 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 HMGB1P20-201ENST00000402555 677 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RNU2-42P-201ENST00000410697 113 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RPL31P12-201ENST00000422587 358 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 VN2R3P-201ENST00000422626 1412 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AC018865.2-201ENST00000423631 129 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RPL21P91-201ENST00000429231 479 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 NPM1P39-201ENST00000449818 867 ntBASIC7.48□□□□□ -1.21
PDZRN3Q9UPQ7 RPS20P4-201ENST00000461659 355 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 259.4 ms