Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL162373.1-201ENST00000620433 407 ntBASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 AC024884.1-201ENST00000620583 399 ntBASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 SNORA17.5-201ENST00000630429 132 ntBASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 LINC02495-203ENST00000636704 242 ntBASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 API5P2-201ENST00000397055 1498 ntBASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.78□□□□□ -1.32
LIMD1Q9UGP4 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.32
LIMD1Q9UGP4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.77□□□□□ -1.32
LIMD1Q9UGP4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 ZNF519P1-201ENST00000449011 1626 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 Y_RNA.556-201ENST00000384677 113 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 Y_RNA.576-201ENST00000384781 102 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 SOD2P1-201ENST00000396543 562 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 RNU2-36P-201ENST00000410361 191 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC009302.1-201ENST00000417147 390 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC093155.2-201ENST00000420734 937 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC096644.2-201ENST00000429278 159 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 HLA-DPA3-207ENST00000454398 229 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC023194.2-201ENST00000465398 406 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC128713.1-201ENST00000471495 306 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 RN7SL177P-201ENST00000476596 299 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 RPS14P8-201ENST00000478778 369 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC008526.1-201ENST00000509149 338 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 SCARNA5-201ENST00000516201 276 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 RNU6-1016P-201ENST00000516689 94 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 RNA5SP206-201ENST00000516703 121 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC036111.2-201ENST00000533247 901 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC023813.4-201ENST00000607580 580 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC004696.1-201ENST00000614345 607 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 MIR6085-201ENST00000618314 110 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AL161637.1-201ENST00000622380 412 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AC097461.1-201ENST00000568928 2821 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 AL034546.1-201ENST00000623740 3693 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 KPNA2P1-201ENST00000458289 1591 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 SAGE4P-201ENST00000442271 3381 ntBASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.77□□□□□ -1.33
LIMD1Q9UGP4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 RNU6-1078P-201ENST00000364522 103 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 RNU6-784P-201ENST00000384330 106 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 SNORA24.1-201ENST00000384401 135 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 DBIP1-201ENST00000401435 260 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 HMGB3P2-201ENST00000411913 584 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AL359092.1-201ENST00000417156 265 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 RAC1P6-201ENST00000423911 575 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AL162388.1-201ENST00000450912 352 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 PPIAP27-201ENST00000453800 265 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 RPL21P8-201ENST00000465083 535 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC058823.1-201ENST00000485315 474 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC026826.1-201ENST00000493002 361 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC025458.1-201ENST00000506046 166 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms