Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC018695.5-201ENST00000605872 315 ntBASIC6.4□□□□□ -1.38
USP35Q9P2H5 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.4□□□□□ -1.38
USP35Q9P2H5 BMS1P21-201ENST00000634565 365 ntBASIC6.4□□□□□ -1.38
USP35Q9P2H5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
USP35Q9P2H5 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
USP35Q9P2H5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.4□□□□□ -1.39
USP35Q9P2H5 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USP35Q9P2H5 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.4□□□□□ -1.39
USP35Q9P2H5 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP35Q9P2H5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP35Q9P2H5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP35Q9P2H5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 AL121657.1-201ENST00000327215 531 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 IL6STP1-201ENST00000346911 1020 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 RNU1-82P-201ENST00000390851 165 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP35Q9P2H5 RSL24D1P4-201ENST00000400938 484 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 COX6CP13-201ENST00000428703 226 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 RPL7P34-201ENST00000433316 712 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 BX842559.2-201ENST00000451418 605 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 RPL23AP24-201ENST00000458203 385 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 AC073073.1-201ENST00000493920 463 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USP35Q9P2H5 IGLVIV-65-201ENST00000517313 360 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 AC145350.1-201ENST00000567426 208 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 MIR4429-201ENST00000580105 73 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USP35Q9P2H5 IMMP1LP1-201ENST00000605170 488 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 AL008729.2-201ENST00000606393 473 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 AC078899.5-201ENST00000612475 178 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 AC114781.5-201ENST00000615297 108 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 AC092184.1-201ENST00000625042 715 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USP35Q9P2H5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 AC130650.2-201ENST00000618736 2403 ntBASIC6.39□□□□□ -1.39
USP35Q9P2H5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.39□□□□□ -1.39
USP35Q9P2H5 AC000123.3-201ENST00000624029 4975 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USP35Q9P2H5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP35Q9P2H5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP35Q9P2H5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP35Q9P2H5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 RNU6-657P-201ENST00000383904 107 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 RNU5A-2P-201ENST00000384337 116 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 RNU6-1122P-201ENST00000384449 107 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 SNORA70E-201ENST00000384492 135 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 ATP5F1P2-201ENST00000398143 760 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 AL591848.1-201ENST00000413092 322 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 RPL7P57-201ENST00000423238 740 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 RPS6P15-201ENST00000431996 751 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 YWHAZP7-201ENST00000436906 631 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 AC104073.1-201ENST00000451988 151 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 MED28P5-201ENST00000528254 438 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 OR5BC1P-201ENST00000529327 739 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 AC092470.1-201ENST00000546187 132 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 MRPS36P5-201ENST00000551909 298 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 AC008782.1-201ENST00000603386 430 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 AC023043.4-201ENST00000612081 449 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 AC008083.4-201ENST00000615076 444 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 AP003485.2-201ENST00000623636 610 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 MTND4P34-201ENST00000572715 1371 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP35Q9P2H5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP35Q9P2H5 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.38□□□□□ -1.39
USP35Q9P2H5 OR56B2P-202ENST00000641377 2453 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 OR51H2P-202ENST00000641424 3046 ntBASIC6.38□□□□□ -1.39
USP35Q9P2H5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP35Q9P2H5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP35Q9P2H5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP35Q9P2H5 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.37□□□□□ -1.39
USP35Q9P2H5 SNRPEP3-201ENST00000338402 276 ntBASIC6.37□□□□□ -1.39
USP35Q9P2H5 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.37□□□□□ -1.39
USP35Q9P2H5 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP35Q9P2H5 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.37□□□□□ -1.39
USP35Q9P2H5 SNORA51.6-201ENST00000384151 125 ntBASIC6.37□□□□□ -1.39
USP35Q9P2H5 RNA5SP345-201ENST00000410646 108 ntBASIC6.37□□□□□ -1.39
USP35Q9P2H5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms