Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SNORA11F-201ENST00000408237 128 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 MIR1302-8-201ENST00000408342 128 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 SETP15-201ENST00000412724 337 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC009237.2-201ENST00000421358 284 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC023347.2-201ENST00000433994 462 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC114495.1-201ENST00000441274 436 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL20A1Q9P218 SYPL1P1-201ENST00000473622 768 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 MTND6P6-201ENST00000478031 263 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC105137.1-201ENST00000484355 562 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 RN7SL691P-201ENST00000494487 301 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 MTCO3P28-201ENST00000513351 515 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 RNU6-678P-201ENST00000516832 109 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 NPM1P6-201ENST00000521088 871 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC090819.1-201ENST00000523800 1111 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 OR5AK1P-201ENST00000524837 922 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 AL160290.3-201ENST00000604869 165 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC105129.3-201ENST00000605455 485 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC112220.3-201ENST00000605502 502 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC006270.3-201ENST00000605967 1036 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 AC091979.2-201ENST00000607514 214 ntBASIC5.01□□□□□ -1.61
COL20A1Q9P218 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL20A1Q9P218 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.01□□□□□ -1.61
COL20A1Q9P218 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL20A1Q9P218 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
COL20A1Q9P218 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COL20A1Q9P218 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL20A1Q9P218 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5□□□□□ -1.61
COL20A1Q9P218 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL20A1Q9P218 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5□□□□□ -1.61
COL20A1Q9P218 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL20A1Q9P218 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL20A1Q9P218 AL391994.1-201ENST00000254724 282 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL20A1Q9P218 SNORD116-1-201ENST00000384335 95 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 RNU6-253P-201ENST00000384730 105 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5□□□□□ -1.61
COL20A1Q9P218 AC062016.2-201ENST00000420950 676 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 RPP40P1-201ENST00000426762 456 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5□□□□□ -1.61
COL20A1Q9P218 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL20A1Q9P218 UBE2D3P4-201ENST00000441973 436 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AL591363.1-201ENST00000450091 483 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 UQCRHP4-201ENST00000471686 272 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 RPL30P11-201ENST00000495304 339 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 RPS4XP18-201ENST00000495480 763 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AC147055.4-201ENST00000504399 745 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5□□□□□ -1.61
COL20A1Q9P218 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5□□□□□ -1.61
COL20A1Q9P218 RNA5SP497-201ENST00000516081 97 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 MRPL49P2-201ENST00000521066 465 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5□□□□□ -1.61
COL20A1Q9P218 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5□□□□□ -1.61
COL20A1Q9P218 AP003730.1-201ENST00000524605 285 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5□□□□□ -1.61
COL20A1Q9P218 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
COL20A1Q9P218 AC074029.1-201ENST00000552531 1044 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AL109766.1-201ENST00000555080 552 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5□□□□□ -1.61
COL20A1Q9P218 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5□□□□□ -1.61
COL20A1Q9P218 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5□□□□□ -1.61
COL20A1Q9P218 MIR3936-201ENST00000584304 110 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 EIF4A2P1-201ENST00000587313 1063 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AC124312.4-201ENST00000605533 310 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AC091946.2-201ENST00000606105 291 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AC245297.2-201ENST00000610119 565 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COL20A1Q9P218 AL607023.1-201ENST00000620045 248 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL20A1Q9P218 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL20A1Q9P218 SMG1P4-204ENST00000523028 4131 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL20A1Q9P218 AC087359.1-201ENST00000508335 1740 ntBASIC5□□□□□ -1.61
COL20A1Q9P218 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL20A1Q9P218 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5□□□□□ -1.61
COL20A1Q9P218 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL20A1Q9P218 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL20A1Q9P218 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms