Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 HMGB1P23-201ENST00000518743 568 ntBASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 OR4A12P-201ENST00000530847 918 ntBASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 MTND5P21-201ENST00000531961 522 ntBASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 AC119501.1-201ENST00000603646 475 ntBASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 AC090617.9-201ENST00000623751 147 ntBASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 AL157700.1-201ENST00000561973 1432 ntBASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 NSRP1P1-201ENST00000444067 1693 ntBASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.49□□□□□ -1.85
CCNB1IP1Q9NPC3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC090337.1-201ENST00000579651 2074 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AL512646.1-201ENST00000269395 1077 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 SNORA70.2-201ENST00000364506 135 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 RNA5SP97-201ENST00000365006 84 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 BTBD10P2-201ENST00000404779 676 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AL356095.1-201ENST00000417217 199 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 MTND4P24-201ENST00000424002 397 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AL356276.2-201ENST00000435919 558 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AL590399.6-201ENST00000446396 307 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 RPS11P1-201ENST00000451072 473 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 RNU6-775P-201ENST00000459318 96 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC010468.1-201ENST00000461022 817 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 RPL21P11-201ENST00000461458 483 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 RN7SL385P-201ENST00000468873 276 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 ACTG1P13-201ENST00000486987 1043 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 HIGD1AP3-201ENST00000515857 278 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 RNU6-751P-201ENST00000516382 101 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 RNA5SP179-201ENST00000517284 121 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 TGIF1P1-201ENST00000558095 802 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AL590392.1-201ENST00000604960 446 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 BX322635.1-201ENST00000605804 496 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC015802.5-201ENST00000607478 399 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC083809.1-201ENST00000615051 472 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 RLIMP1-201ENST00000339626 1680 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 AC058791.1-201ENST00000608412 3198 ntBASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCNB1IP1Q9NPC3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 SPRR2C-201ENST00000290702 219 ntBASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 MIR199A2-201ENST00000385289 110 ntBASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 AL355379.1-201ENST00000405542 640 ntBASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 RNU6-628P-201ENST00000410675 107 ntBASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 OSTCP5-201ENST00000425293 453 ntBASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 MTND4LP14-201ENST00000429447 288 ntBASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 PSMA2P3-201ENST00000429685 675 ntBASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 AC006326.1-201ENST00000445465 787 ntBASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.47□□□□□ -1.85
CCNB1IP1Q9NPC3 AL049830.2-201ENST00000480072 201 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms