Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 ZNF734P-201ENST00000419494 1534 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 ASNSP1-201ENST00000518311 1939 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 MTND4LP20-201ENST00000402379 270 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 RPL34P3-201ENST00000421454 338 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 RIMKLBP2-201ENST00000424737 654 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC127526.2-201ENST00000426436 775 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 ISCA1P1-201ENST00000426679 387 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 NPM1P49-201ENST00000448027 714 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 TCEA1P1-201ENST00000449716 880 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC004924.1-201ENST00000480160 781 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 MTND1P3-201ENST00000484956 952 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC011352.1-201ENST00000512300 793 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 RNU6-513P-201ENST00000516104 104 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 RNU2-46P-201ENST00000517038 113 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 RNU6-201P-201ENST00000517100 61 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 IGLV3-24-201ENST00000517477 197 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC068993.1-201ENST00000546724 589 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 ZNF519P2-201ENST00000557032 169 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC034268.2-201ENST00000571784 482 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 CKS1BP3-201ENST00000600888 237 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AF250324.2-201ENST00000608299 610 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AL078621.3-201ENST00000623707 2042 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AC017104.4-201ENST00000636283 1592 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC104623.2-202ENST00000623477 4002 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 RN7SKP160-201ENST00000363804 340 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 RNA5SP132-201ENST00000364725 118 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 RNU6-1207P-201ENST00000384343 107 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 HMGB1P20-201ENST00000402555 677 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC016739.1-201ENST00000405359 345 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 RNU2-15P-201ENST00000410692 191 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 snoU13.8-201ENST00000458890 104 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 RN7SL515P-201ENST00000463999 297 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC109462.1-201ENST00000491087 368 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC011005.3-201ENST00000491624 395 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 HIGD1AP3-201ENST00000515857 278 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC022616.6-201ENST00000520479 119 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC134698.4-201ENST00000523451 826 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 OR5AN2P-201ENST00000534535 896 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 CCNG2P1-201ENST00000549521 1000 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC009101.1-201ENST00000568135 242 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC127024.5-201ENST00000580085 462 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 OR10AB1P-201ENST00000609613 938 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC091304.9-201ENST00000612091 226 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC024941.1-201ENST00000612250 334 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 AC136475.10-201ENST00000620253 385 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 MIR4496-201ENST00000635896 61 ntBASIC5.54□□□□□ -1.52
TRIM55Q9BYV6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms