Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AL049610.1-201ENST00000423374 372 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 CKS1BP6-201ENST00000424932 240 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 RPS20P1-201ENST00000434853 354 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AL353706.1-201ENST00000436728 494 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 SNRPEP7-201ENST00000438350 220 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 CEACAMP7-201ENST00000444105 496 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 MRPL48P1-201ENST00000445390 636 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 GEMIN8P3-201ENST00000445417 720 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 PTMAP3-201ENST00000447474 330 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC073850.1-201ENST00000449243 255 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 MEMO1P3-201ENST00000459811 302 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 RPS26P39-201ENST00000469206 341 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 RN7SL629P-201ENST00000489622 285 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 MTND4LP31-201ENST00000514859 294 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 RN7SKP147-201ENST00000517154 244 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC136618.2-201ENST00000575091 400 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 MIR3691-201ENST00000578066 90 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC119751.7-201ENST00000600494 245 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AP001521.2-201ENST00000608772 546 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC009878.1-201ENST00000621819 340 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC012414.7-202ENST00000622705 1090 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AP002799.1-201ENST00000623552 423 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 AC092656.1-203ENST00000624134 423 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 SCN1A-220ENST00000641603 12506 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 KARSP3-201ENST00000571212 1504 ntBASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM54Q9BYV2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 DDX18P3-201ENST00000404856 2007 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL359922.3-201ENST00000624779 1670 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 RNA5SP305-201ENST00000362665 119 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 U8.4-201ENST00000363626 134 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 Y_RNA.559-201ENST00000384686 107 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 MIR765-201ENST00000390226 114 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL121972.1-201ENST00000402023 252 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 SSXP10-201ENST00000402595 565 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 RNU4-34P-201ENST00000410431 124 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 RN7SKP213-201ENST00000410746 298 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 ATG4AP1-201ENST00000416893 538 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 FABP7P2-201ENST00000429946 379 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 NMNAT1P2-201ENST00000435192 860 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 PRPF38AP2-201ENST00000438179 851 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL512286.1-201ENST00000439244 400 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 SNRPGP9-201ENST00000456025 225 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 RPL30P9-201ENST00000465586 330 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC140172.1-201ENST00000502928 141 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 MTND5P4-201ENST00000514978 288 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC104057.1-201ENST00000515547 497 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 HSPE1P3-201ENST00000559254 309 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC124068.1-201ENST00000563131 678 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC006362.1-201ENST00000567392 174 ntBASIC4.8□□□□□ -1.64
TRIM54Q9BYV2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms