Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 snoU109.6-201ENST00000516831 118 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AP001636.2-201ENST00000525517 696 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AC231759.1-201ENST00000616455 597 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 LINC00901.1-201ENST00000617252 152 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 SAGE4P-201ENST00000442271 3381 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 MTCO1P22-201ENST00000604619 1360 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 RNU6-7-201ENST00000364784 107 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 RNU6-8-201ENST00000365467 107 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 OR6C64P-201ENST00000419708 825 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AC110794.1-201ENST00000505816 425 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AC099489.2-201ENST00000574976 260 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC104297.1-201ENST00000393779 870 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AL136116.1-201ENST00000403591 381 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 USP12PY-201ENST00000427677 1064 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC022018.1-201ENST00000430685 241 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 RPL7P36-201ENST00000444633 681 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 OR1AB1P-201ENST00000585564 761 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC024153.1-201ENST00000603103 365 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 RNA5SP322-201ENST00000363617 119 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AL356057.1-202ENST00000402263 756 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC016696.1-201ENST00000446949 318 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AL133477.1-201ENST00000457472 514 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC010307.1-201ENST00000467206 836 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC009812.2-201ENST00000517657 457 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AL121576.1-201ENST00000556055 276 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 SULT1C2P2-201ENST00000562517 294 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 VN1R90P-201ENST00000595717 726 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AL162713.1-201ENST00000604480 262 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 MIR22-201ENST00000362190 85 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 RPL31P50-201ENST00000471002 296 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 CYCSP41-201ENST00000616920 296 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 MRPL50P2-201ENST00000416821 482 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC027176.1-201ENST00000560204 514 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 MIR4738-201ENST00000579134 87 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 BNIP3P38-201ENST00000601117 544 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC099654.11-201ENST00000638857 294 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 AC073869.7-201ENST00000640874 297 ntBASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13DQ5THJ4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 AC073508.1-201ENST00000428866 656 ntBASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 AC010095.1-201ENST00000443543 144 ntBASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 RPS20P32-201ENST00000456044 356 ntBASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 ACTG1P13-201ENST00000486987 1043 ntBASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
VPS13DQ5THJ4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms