Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H3F3AP84243 MTND4P22-201ENST00000413116 1169 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 LIPT1P1-201ENST00000415870 1186 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 AC002075.2-201ENST00000425207 252 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
H3F3AP84243 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.16□□□□□ -1.9
H3F3AP84243 RPS7P5-201ENST00000441482 581 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.16□□□□□ -1.9
H3F3AP84243 U3.44-201ENST00000458938 192 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 TRBV8-2-201ENST00000475637 270 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 AC078785.3-201ENST00000476607 425 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 RPS3AP50-201ENST00000487064 803 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 CDH12P2-201ENST00000504393 298 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.16□□□□□ -1.9
H3F3AP84243 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.16□□□□□ -1.9
H3F3AP84243 AC104619.4-201ENST00000510773 249 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 SNORA67.7-201ENST00000516664 135 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 SNORA70.18-201ENST00000516696 98 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 IGKV2-23-201ENST00000518729 323 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 OR5AP1P-201ENST00000529730 940 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 AC103843.2-201ENST00000530523 682 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 AC026333.2-201ENST00000542164 106 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 CYP2C60P-201ENST00000566088 139 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 MIR4738-201ENST00000579134 87 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.16□□□□□ -1.9
H3F3AP84243 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.16□□□□□ -1.9
H3F3AP84243 MIR3158-1-201ENST00000583596 81 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 SNORA51-201ENST00000606420 132 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 AL450489.1-201ENST00000612071 468 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H3F3AP84243 AL365440.1-201ENST00000436135 2167 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H3F3AP84243 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H3F3AP84243 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H3F3AP84243 ZNF542P-204ENST00000482727 1305 ntBASIC3.16□□□□□ -1.9
H3F3AP84243 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
H3F3AP84243 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
H3F3AP84243 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
H3F3AP84243 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.15□□□□□ -1.91
H3F3AP84243 AL359837.1-201ENST00000381357 287 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.15□□□□□ -1.91
H3F3AP84243 HMGB1P10-201ENST00000395823 563 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.15□□□□□ -1.91
H3F3AP84243 RN7SKP111-201ENST00000410349 271 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 RNU2-37P-201ENST00000410695 177 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AC017079.2-201ENST00000416102 485 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 MTND4P11-201ENST00000417020 1058 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AIMP1P1-201ENST00000418670 937 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 DBIP2-201ENST00000419076 262 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.15□□□□□ -1.91
H3F3AP84243 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.15□□□□□ -1.91
H3F3AP84243 AC092641.1-201ENST00000440229 772 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.15□□□□□ -1.91
H3F3AP84243 RPL5P13-201ENST00000462840 709 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AC091564.1-201ENST00000464563 479 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AL049830.2-201ENST00000480072 201 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AC078817.1-201ENST00000492623 435 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.15□□□□□ -1.91
H3F3AP84243 AC026784.1-201ENST00000507986 352 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 SNORA70.17-201ENST00000516449 133 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.15□□□□□ -1.91
H3F3AP84243 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.15□□□□□ -1.91
H3F3AP84243 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.15□□□□□ -1.91
H3F3AP84243 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.15□□□□□ -1.91
H3F3AP84243 AC092628.2-201ENST00000622492 339 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AC112200.1-201ENST00000625015 234 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 MIR4278-201ENST00000636094 69 ntBASIC3.15□□□□□ -1.91
H3F3AP84243 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
H3F3AP84243 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.15□□□□□ -1.91
H3F3AP84243 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
H3F3AP84243 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.14□□□□□ -1.91
H3F3AP84243 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
H3F3AP84243 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.14□□□□□ -1.91
H3F3AP84243 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
H3F3AP84243 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.14□□□□□ -1.91
H3F3AP84243 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
H3F3AP84243 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
H3F3AP84243 MIR153-1-201ENST00000384914 90 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 CCNB2P1-201ENST00000399411 1150 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 HSPD1P21-201ENST00000436541 245 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 Z95327.1-201ENST00000446082 482 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.14□□□□□ -1.91
H3F3AP84243 AP000893.1-201ENST00000474462 794 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 RPL30P11-201ENST00000495304 339 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 AC006499.5-201ENST00000505037 514 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 RN7SKP82-201ENST00000516786 223 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.14□□□□□ -1.91
H3F3AP84243 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.14□□□□□ -1.91
H3F3AP84243 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.14□□□□□ -1.91
H3F3AP84243 DUXAP6-201ENST00000553858 601 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.14□□□□□ -1.91
H3F3AP84243 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.14□□□□□ -1.91
H3F3AP84243 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.14□□□□□ -1.91
H3F3AP84243 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
H3F3AP84243 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.14□□□□□ -1.91
H3F3AP84243 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.14□□□□□ -1.91
H3F3AP84243 MTCO2P22-201ENST00000603246 681 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 AC245389.1-201ENST00000605141 529 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
H3F3AP84243 AC006133.1-201ENST00000617106 264 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms