Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
AP3S2P59780 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
AP3S2P59780 AL353705.1-201ENST00000433468 480 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.06□□□□□ -1.92
AP3S2P59780 CBX1P1-201ENST00000440184 427 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3S2P59780 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3S2P59780 CYCSP53-201ENST00000455540 265 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.06□□□□□ -1.92
AP3S2P59780 RN7SL594P-201ENST00000470590 287 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 AC022034.3-201ENST00000471393 478 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 UQCRHP4-201ENST00000471686 272 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 HMGN2P13-201ENST00000476476 274 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.06□□□□□ -1.92
AP3S2P59780 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3S2P59780 AC117529.2-201ENST00000512159 2068 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 RNA5SP380-201ENST00000517190 98 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3S2P59780 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.06□□□□□ -1.92
AP3S2P59780 AP002812.4-201ENST00000532139 286 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
AP3S2P59780 AP003717.3-201ENST00000544832 1180 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3S2P59780 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
AP3S2P59780 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3S2P59780 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.06□□□□□ -1.92
AP3S2P59780 AC091488.1-201ENST00000604239 660 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 AC004832.5-201ENST00000608677 401 ntBASIC3.06□□□□□ -1.92
AP3S2P59780 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.06□□□□□ -1.92
AP3S2P59780 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.06□□□□□ -1.92
AP3S2P59780 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.06□□□□□ -1.92
AP3S2P59780 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.05□□□□□ -1.92
AP3S2P59780 AC073055.1-201ENST00000456901 1621 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
AP3S2P59780 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
AP3S2P59780 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
AP3S2P59780 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
AP3S2P59780 RPS16P5-201ENST00000406501 404 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 MTND4P22-201ENST00000413116 1169 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3S2P59780 AC023128.2-201ENST00000420880 1223 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3S2P59780 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.05□□□□□ -1.92
AP3S2P59780 AL360081.1-201ENST00000428299 555 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP3S2P59780 TBCAP1-201ENST00000436520 327 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 ISCA1P2-201ENST00000438679 421 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 RPL7P61-201ENST00000451721 751 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 MTND3P6-201ENST00000485242 339 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.05□□□□□ -1.92
AP3S2P59780 SETP14-201ENST00000497538 873 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP3S2P59780 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3S2P59780 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP3S2P59780 AC117525.1-201ENST00000515228 503 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 HIGD1AP3-201ENST00000515857 278 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.05□□□□□ -1.92
AP3S2P59780 RNU6-1073P-201ENST00000517182 106 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3S2P59780 AC104027.1-201ENST00000521887 300 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3S2P59780 MED28P5-201ENST00000528254 438 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3S2P59780 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.05□□□□□ -1.92
AP3S2P59780 ZNF92P3-201ENST00000596594 954 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 AP004372.1-201ENST00000604842 844 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 HMGB1P51-201ENST00000605166 638 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 AC012557.1-201ENST00000607115 611 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 AC019176.2-201ENST00000611579 315 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 AF117829.1-206ENST00000621883 3802 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 AC073476.4-201ENST00000628409 72 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 FAM35CP-201ENST00000554755 2470 ntBASIC3.05□□□□□ -1.92
AP3S2P59780 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP3S2P59780 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.05□□□□□ -1.92
AP3S2P59780 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
AP3S2P59780 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
AP3S2P59780 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
AP3S2P59780 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.04□□□□□ -1.92
AP3S2P59780 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
AP3S2P59780 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
AP3S2P59780 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
AP3S2P59780 AC079741.1-201ENST00000321498 212 ntBASIC3.04□□□□□ -1.92
AP3S2P59780 RNA5SP447-201ENST00000363749 119 ntBASIC3.04□□□□□ -1.92
AP3S2P59780 RNU1-101P-201ENST00000391171 127 ntBASIC3.04□□□□□ -1.92
AP3S2P59780 RNU4-6P-201ENST00000410804 122 ntBASIC3.04□□□□□ -1.92
AP3S2P59780 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.04□□□□□ -1.92
AP3S2P59780 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3S2P59780 TOMM22P1-201ENST00000418578 312 ntBASIC3.04□□□□□ -1.92
AP3S2P59780 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3S2P59780 AC069213.2-201ENST00000420238 366 ntBASIC3.04□□□□□ -1.92
AP3S2P59780 COX6CP15-201ENST00000426313 211 ntBASIC3.04□□□□□ -1.92
AP3S2P59780 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3S2P59780 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.04□□□□□ -1.92
AP3S2P59780 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.04□□□□□ -1.92
AP3S2P59780 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3S2P59780 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.04□□□□□ -1.92
AP3S2P59780 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
AP3S2P59780 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms