Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.23□□□□□ -1.57
RHBDL3P58872 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RHBDL3P58872 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDL3P58872 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDL3P58872 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RHBDL3P58872 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.23□□□□□ -1.57
RHBDL3P58872 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.22□□□□□ -1.57
RHBDL3P58872 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RHBDL3P58872 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.22□□□□□ -1.57
RHBDL3P58872 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RHBDL3P58872 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.22□□□□□ -1.57
RHBDL3P58872 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.22□□□□□ -1.57
RHBDL3P58872 ZNF37BP-203ENST00000452306 1352 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 LARP1BP1-201ENST00000506036 1359 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 MIR383-201ENST00000362257 73 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 RNU5D-1-201ENST00000363299 116 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 RNU1-13P-201ENST00000384499 162 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 AC097374.1-203ENST00000400783 485 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 MFSD13B-201ENST00000420133 1290 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 RPL7P44-201ENST00000424827 742 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.22□□□□□ -1.57
RHBDL3P58872 RPL31P54-201ENST00000429803 370 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
RHBDL3P58872 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.22□□□□□ -1.57
RHBDL3P58872 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 MTCYBP11-201ENST00000447254 1109 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.22□□□□□ -1.57
RHBDL3P58872 ATP1B1P1-201ENST00000509767 915 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.22□□□□□ -1.57
RHBDL3P58872 RNA5SP49-201ENST00000516450 115 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.22□□□□□ -1.57
RHBDL3P58872 AP003385.6-201ENST00000531603 374 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.22□□□□□ -1.57
RHBDL3P58872 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.22□□□□□ -1.57
RHBDL3P58872 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.22□□□□□ -1.57
RHBDL3P58872 RN7SL600P-201ENST00000581811 299 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.22□□□□□ -1.57
RHBDL3P58872 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.22□□□□□ -1.57
RHBDL3P58872 MIR8069-1-201ENST00000616627 86 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 AC109809.1-201ENST00000619665 545 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 MIR8069-2-201ENST00000621412 86 ntBASIC5.22□□□□□ -1.57
RHBDL3P58872 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.22□□□□□ -1.57
RHBDL3P58872 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
RHBDL3P58872 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RHBDL3P58872 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDL3P58872 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDL3P58872 RNA5SP502-201ENST00000362694 119 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.21□□□□□ -1.58
RHBDL3P58872 SNORA57.1-201ENST00000391227 145 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 RPS26P8-201ENST00000393490 348 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 AL121972.1-201ENST00000402023 252 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 AL590084.1-201ENST00000407885 387 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 RNU2-42P-201ENST00000410697 113 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.21□□□□□ -1.58
RHBDL3P58872 AL157831.1-201ENST00000426134 473 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 RPEP2-201ENST00000432149 701 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.21□□□□□ -1.58
RHBDL3P58872 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDL3P58872 AC114755.5-201ENST00000447760 831 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 SNORD11.1-201ENST00000459482 85 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDL3P58872 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.21□□□□□ -1.58
RHBDL3P58872 AC090502.2-201ENST00000549267 280 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.21□□□□□ -1.58
RHBDL3P58872 CCDC58P3-201ENST00000590792 430 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 AL161729.3-201ENST00000603533 673 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 IGHV3-29-201ENST00000604817 344 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 AC010201.1-201ENST00000605051 540 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 AL109618.2-201ENST00000605527 211 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 AC007546.1-201ENST00000619452 559 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RHBDL3P58872 AC073348.1-201ENST00000623002 331 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.21□□□□□ -1.58
RHBDL3P58872 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDL3P58872 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDL3P58872 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDL3P58872 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDL3P58872 GDI2P1-201ENST00000429312 1336 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RHBDL3P58872 MUC2-202ENST00000613187 4845 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 AL359893.1-201ENST00000447628 1580 ntBASIC5.21□□□□□ -1.58
RHBDL3P58872 NOL8P1-201ENST00000508336 3529 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDL3P58872 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDL3P58872 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDL3P58872 AC107068.1-201ENST00000563286 4218 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDL3P58872 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDL3P58872 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDL3P58872 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms