Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC114878.1-201ENST00000441166 358 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 CEACAMP4-201ENST00000457676 421 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN18P56856 AC078918.1-201ENST00000498515 228 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.43□□□□□ -1.86
CLDN18P56856 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN18P56856 SNORA67.7-201ENST00000516664 135 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN18P56856 AC022695.1-201ENST00000522089 237 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN18P56856 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN18P56856 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN18P56856 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.43□□□□□ -1.86
CLDN18P56856 SERPINE4P-201ENST00000554978 281 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.43□□□□□ -1.86
CLDN18P56856 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN18P56856 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN18P56856 YWHAQP7-201ENST00000603536 658 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 AC245389.1-201ENST00000605141 529 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 HMGN2P28-201ENST00000606102 262 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.43□□□□□ -1.86
CLDN18P56856 AC103710.3-201ENST00000608157 948 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 AL391261.4-201ENST00000616012 481 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN18P56856 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN18P56856 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN18P56856 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CLDN18P56856 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
CLDN18P56856 IPO8P1-201ENST00000455509 3109 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN18P56856 AL157700.1-201ENST00000561973 1432 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 AL161912.2-201ENST00000565707 3007 ntBASIC3.43□□□□□ -1.86
CLDN18P56856 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN18P56856 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN18P56856 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN18P56856 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN18P56856 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN18P56856 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN18P56856 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLDN18P56856 RNU6-328P-201ENST00000390887 106 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 EIF5P1-201ENST00000400019 1231 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 PRRC2CP1-201ENST00000404428 159 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 RNU2-17P-201ENST00000410290 190 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AL139247.1-201ENST00000422768 325 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN18P56856 AC018644.1-201ENST00000429934 551 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN18P56856 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN18P56856 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN18P56856 AL590399.6-201ENST00000446396 307 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 NPM1P49-201ENST00000448027 714 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AL133547.1-201ENST00000448546 220 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN18P56856 CFTRP1-201ENST00000456646 183 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AL133162.1-201ENST00000463228 453 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 RPL7L1P8-201ENST00000469911 741 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AC104689.1-201ENST00000473356 768 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AC026726.1-201ENST00000512859 601 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AC010306.1-201ENST00000523223 1117 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 OR4R3P-201ENST00000525084 838 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 C1DP5-201ENST00000525775 383 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN18P56856 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN18P56856 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN18P56856 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN18P56856 MIR3158-1-201ENST00000583596 81 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.42□□□□□ -1.86
CLDN18P56856 AC079610.2-201ENST00000604818 690 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AC012531.5-201ENST00000611375 151 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN18P56856 AC006133.1-201ENST00000617106 264 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 U73479.1-201ENST00000618062 168 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN18P56856 CR392039.5-201ENST00000623201 510 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 U6.107-201ENST00000637108 79 ntBASIC3.42□□□□□ -1.86
CLDN18P56856 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN18P56856 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN18P56856 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN18P56856 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN18P56856 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN18P56856 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
CLDN18P56856 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN18P56856 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLDN18P56856 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN18P56856 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN18P56856 RNA5SP322-201ENST00000363617 119 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 SNORD115-48-201ENST00000364764 76 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CLDN18P56856 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLDN18P56856 SNORA48.7-201ENST00000391302 135 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN18P56856 RN7SKP56-201ENST00000410513 331 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN18P56856 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN18P56856 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN18P56856 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN18P56856 AL390879.2-203ENST00000426943 1121 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 AL365396.1-201ENST00000430854 671 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 RPL21P112-201ENST00000434403 463 ntBASIC3.41□□□□□ -1.86
CLDN18P56856 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms