Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
TRIM23P36406 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM23P36406 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM23P36406 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM23P36406 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM23P36406 MIR423-201ENST00000362201 94 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 RNA5SP399-201ENST00000364003 117 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM23P36406 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM23P36406 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM23P36406 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM23P36406 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM23P36406 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM23P36406 FABP5P3-201ENST00000437960 408 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AL096829.2-201ENST00000446582 742 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 TVP23BP2-201ENST00000455082 615 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AL136097.1-201ENST00000456945 913 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AP000873.1-201ENST00000463987 400 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 RPL7L1P8-201ENST00000469911 741 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AC092902.1-201ENST00000486999 259 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 RPS26P15-201ENST00000488067 348 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AC008565.1-201ENST00000509046 885 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 RNA5SP179-201ENST00000517284 121 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM23P36406 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM23P36406 OR5M7P-201ENST00000526140 972 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM23P36406 AC006130.2-201ENST00000586202 326 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM23P36406 DNAJC19P3-201ENST00000594491 331 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM23P36406 AC091167.4-201ENST00000605079 184 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AL034351.1-201ENST00000605288 668 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AC026741.1-201ENST00000605892 482 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AC005014.3-201ENST00000605985 190 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AP005229.2-201ENST00000609980 697 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AC096586.1-201ENST00000610267 561 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM23P36406 AL109620.1-201ENST00000618738 1197 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AC253576.2-201ENST00000618815 580 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM23P36406 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM23P36406 AC119744.1-201ENST00000454746 1715 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 USP8P1-201ENST00000494673 3183 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM23P36406 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM23P36406 AL592494.2-201ENST00000425455 1548 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 AC046144.1-201ENST00000478559 1853 ntBASIC3.94□□□□□ -1.78
TRIM23P36406 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM23P36406 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM23P36406 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
TRIM23P36406 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM23P36406 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM23P36406 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
TRIM23P36406 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM23P36406 AC018555.1-201ENST00000567548 1980 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM23P36406 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM23P36406 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TRIM23P36406 RNU6-481P-201ENST00000384194 107 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM23P36406 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM23P36406 AL035405.1-201ENST00000400795 710 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 ATF1P1-201ENST00000406040 927 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 SNORA3C-201ENST00000408792 125 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 RN7SKP159-201ENST00000410657 292 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AC114814.2-201ENST00000419195 485 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM23P36406 MTCO2P1-201ENST00000424648 477 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM23P36406 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM23P36406 RPS26P40-201ENST00000435209 294 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AC006994.1-201ENST00000438212 839 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM23P36406 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM23P36406 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM23P36406 GTF2IP12-201ENST00000456547 356 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 CFTRP1-201ENST00000456646 183 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM23P36406 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM23P36406 RPL7L1P13-201ENST00000511702 739 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM23P36406 Vault.1-201ENST00000516474 102 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 PTP4A1P6-201ENST00000531034 478 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM23P36406 AC095057.3-201ENST00000567102 1157 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AC012254.4-201ENST00000588843 273 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AC010680.4-201ENST00000605334 543 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AC090912.3-201ENST00000609775 533 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AC099669.2-201ENST00000616549 437 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AL354798.1-201ENST00000622505 329 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 AL138960.2-201ENST00000625145 535 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
TRIM23P36406 FAM91A3P-201ENST00000456826 2544 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
TRIM23P36406 DCAF13P3-201ENST00000561147 1334 ntBASIC3.93□□□□□ -1.78
TRIM23P36406 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM23P36406 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
TRIM23P36406 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
TRIM23P36406 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms