Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC090912.3-201ENST00000609775 533 ntBASIC3.82□□□□□ -1.8
HMGCLP35914 RMST_10.1-201ENST00000616309 154 ntBASIC3.82□□□□□ -1.8
HMGCLP35914 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGCLP35914 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HMGCLP35914 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HMGCLP35914 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCLP35914 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCLP35914 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCLP35914 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCLP35914 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCLP35914 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCLP35914 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCLP35914 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HMGCLP35914 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HMGCLP35914 AC006042.3-201ENST00000454684 1469 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 MTND4P9-201ENST00000507819 1346 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCLP35914 RNU6-543P-201ENST00000362576 108 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 RNA5SP479-201ENST00000364858 117 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 RN7SKP56-201ENST00000410513 331 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 AC013404.1-201ENST00000413068 249 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 AC105402.1-201ENST00000413336 545 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 RPS12P23-201ENST00000419579 400 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 PTP4A1P5-201ENST00000420305 455 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 AC013262.1-201ENST00000426710 252 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 NPM1P34-201ENST00000428821 893 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCLP35914 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGCLP35914 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCLP35914 RPL21P18-201ENST00000469899 480 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGCLP35914 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCLP35914 RNU6-352P-201ENST00000516908 107 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGCLP35914 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
HMGCLP35914 AC022790.1-201ENST00000522872 204 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 AP002812.4-201ENST00000532139 286 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.81□□□□□ -1.8
HMGCLP35914 AL451086.1-201ENST00000605596 223 ntBASIC3.81□□□□□ -1.8
HMGCLP35914 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCLP35914 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCLP35914 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HMGCLP35914 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCLP35914 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCLP35914 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCLP35914 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGCLP35914 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
HMGCLP35914 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HMGCLP35914 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCLP35914 SNORD6-201ENST00000365444 73 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCLP35914 AL355143.1-201ENST00000407101 841 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCLP35914 AC008173.1-201ENST00000418901 264 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 USP12PY-201ENST00000427677 1064 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 FO393414.1-201ENST00000428697 1184 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 RPS7P2-201ENST00000435134 607 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCLP35914 MED6P1-201ENST00000439659 713 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 RPL6P5-201ENST00000445678 828 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCLP35914 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCLP35914 AC005912.1-201ENST00000495392 255 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 NIPA2P2-201ENST00000496376 1083 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 AC093801.2-201ENST00000503966 1050 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 NAMPTP2-201ENST00000505629 1115 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 AC119751.4-201ENST00000507498 357 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 RAC1P2-201ENST00000511164 579 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 NPM1P41-201ENST00000512920 831 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGCLP35914 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCLP35914 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.8□□□□□ -1.8
HMGCLP35914 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCLP35914 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCLP35914 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCLP35914 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCLP35914 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 AL139022.2-201ENST00000606934 443 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 AF129408.1-201ENST00000608767 431 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 AL391834.1-201ENST00000609609 560 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 AL391834.2-201ENST00000609982 546 ntBASIC3.8□□□□□ -1.8
HMGCLP35914 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCLP35914 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCLP35914 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCLP35914 AC138393.1-206ENST00000540997 1886 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 MTCO1P18-201ENST00000455518 1419 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCLP35914 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCLP35914 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms