Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL5A1P20908 OTUD4P1-201ENST00000237841 3067 ntBASIC3.22□□□□□ -1.89
COL5A1P20908 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.22□□□□□ -1.89
COL5A1P20908 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
COL5A1P20908 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
COL5A1P20908 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
COL5A1P20908 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
COL5A1P20908 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.21□□□□□ -1.89
COL5A1P20908 Z98941.1-201ENST00000407764 100 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 RHEBP3-201ENST00000411920 351 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 Z99755.1-201ENST00000414048 380 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 RPL23AP69-201ENST00000431134 458 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 AL513175.1-201ENST00000431492 780 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 AL121890.1-201ENST00000435457 205 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.21□□□□□ -1.89
COL5A1P20908 AC006518.1-201ENST00000541449 943 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.21□□□□□ -1.89
COL5A1P20908 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.21□□□□□ -1.89
COL5A1P20908 AC092868.3-201ENST00000560515 784 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 CYP2C60P-201ENST00000566088 139 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 BRDTP1-201ENST00000605735 677 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 AL157817.1-201ENST00000614264 790 ntBASIC3.21□□□□□ -1.89
COL5A1P20908 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.21□□□□□ -1.89
COL5A1P20908 NEAT1-202ENST00000501122 22743 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
COL5A1P20908 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL5A1P20908 AC068647.1-201ENST00000489539 2265 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL5A1P20908 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
COL5A1P20908 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
COL5A1P20908 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL5A1P20908 RN7SKP56-201ENST00000410513 331 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 RNA5SP293-201ENST00000410527 113 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 RAC1P3-201ENST00000416129 580 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 AC093698.1-201ENST00000423843 571 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 SAGE4P-201ENST00000442271 3381 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 AL357552.1-201ENST00000445254 415 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.21□□□□□ -1.9
COL5A1P20908 FGF7P3-201ENST00000454645 303 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.21□□□□□ -1.9
COL5A1P20908 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.21□□□□□ -1.9
COL5A1P20908 PSMA2P1-201ENST00000526365 646 ntBASIC3.21□□□□□ -1.9
COL5A1P20908 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.21□□□□□ -1.9
COL5A1P20908 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.21□□□□□ -1.9
COL5A1P20908 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.21□□□□□ -1.9
COL5A1P20908 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.21□□□□□ -1.9
COL5A1P20908 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.21□□□□□ -1.9
COL5A1P20908 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL5A1P20908 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL5A1P20908 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL5A1P20908 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL5A1P20908 OR52B1P-201ENST00000316506 909 ntBASIC3.2□□□□□ -1.9
COL5A1P20908 MTND4P22-201ENST00000413116 1169 ntBASIC3.2□□□□□ -1.9
COL5A1P20908 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.2□□□□□ -1.9
COL5A1P20908 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.2□□□□□ -1.9
COL5A1P20908 AC091544.1-201ENST00000484702 348 ntBASIC3.2□□□□□ -1.9
COL5A1P20908 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
COL5A1P20908 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.2□□□□□ -1.9
COL5A1P20908 IGLVIV-53-201ENST00000520107 367 ntBASIC3.2□□□□□ -1.9
COL5A1P20908 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.2□□□□□ -1.9
COL5A1P20908 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.2□□□□□ -1.9
COL5A1P20908 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.2□□□□□ -1.9
COL5A1P20908 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.2□□□□□ -1.9
COL5A1P20908 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL5A1P20908 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL5A1P20908 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL5A1P20908 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL5A1P20908 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL5A1P20908 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL5A1P20908 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL5A1P20908 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.19□□□□□ -1.9
COL5A1P20908 RNU1-70P-201ENST00000362618 164 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL5A1P20908 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL5A1P20908 SNORA7.4-201ENST00000384249 137 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 AL391417.1-201ENST00000404100 426 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 MIR1261-201ENST00000408659 82 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.19□□□□□ -1.9
COL5A1P20908 BX890604.2-201ENST00000427883 474 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.19□□□□□ -1.9
COL5A1P20908 RPL23AP73-201ENST00000492507 471 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 AC021678.1-201ENST00000505195 936 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.19□□□□□ -1.9
COL5A1P20908 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL5A1P20908 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.19□□□□□ -1.9
COL5A1P20908 AL121603.1-201ENST00000553815 142 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.19□□□□□ -1.9
COL5A1P20908 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.19□□□□□ -1.9
COL5A1P20908 AC018692.3-201ENST00000623929 123 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 CFTRP2-201ENST00000634304 199 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL5A1P20908 THAP12P8-201ENST00000447914 2115 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 XKRY2-202ENST00000623874 1581 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 XKRY-202ENST00000624960 1581 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.19□□□□□ -1.9
COL5A1P20908 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.19□□□□□ -1.9
COL5A1P20908 SNORA54-201ENST00000384281 123 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms