Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC016877.3-201ENST00000606778 504 ntBASIC5.7□□□□□ -1.5
ATF3P18847 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.7□□□□□ -1.5
ATF3P18847 AC105227.2-201ENST00000615075 605 ntBASIC5.7□□□□□ -1.5
ATF3P18847 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ATF3P18847 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF3P18847 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATF3P18847 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF3P18847 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF3P18847 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.7□□□□□ -1.5
ATF3P18847 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF3P18847 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
ATF3P18847 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ATF3P18847 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATF3P18847 RNU4-92P-201ENST00000363783 136 ntBASIC5.69□□□□□ -1.5
ATF3P18847 MIR218-2-201ENST00000385006 110 ntBASIC5.69□□□□□ -1.5
ATF3P18847 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF3P18847 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF3P18847 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF3P18847 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
ATF3P18847 AL356320.2-201ENST00000417263 507 ntBASIC5.69□□□□□ -1.5
ATF3P18847 IPMKP1-201ENST00000425988 855 ntBASIC5.69□□□□□ -1.5
ATF3P18847 AP000907.1-201ENST00000428428 510 ntBASIC5.69□□□□□ -1.5
ATF3P18847 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.69□□□□□ -1.5
ATF3P18847 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.69□□□□□ -1.5
ATF3P18847 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF3P18847 GTF2IP7-202ENST00000436677 309 ntBASIC5.69□□□□□ -1.5
ATF3P18847 CR769776.1-201ENST00000441254 787 ntBASIC5.69□□□□□ -1.5
ATF3P18847 HMGB1P16-201ENST00000447155 540 ntBASIC5.69□□□□□ -1.5
ATF3P18847 AC104306.1-201ENST00000449702 371 ntBASIC5.69□□□□□ -1.5
ATF3P18847 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF3P18847 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATF3P18847 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATF3P18847 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.69□□□□□ -1.5
ATF3P18847 AC048346.1-201ENST00000510247 144 ntBASIC5.69□□□□□ -1.5
ATF3P18847 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.69□□□□□ -1.5
ATF3P18847 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.69□□□□□ -1.5
ATF3P18847 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.69□□□□□ -1.5
ATF3P18847 EEF1A1P37-201ENST00000522748 715 ntBASIC5.69□□□□□ -1.5
ATF3P18847 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.69□□□□□ -1.5
ATF3P18847 AP001317.1-201ENST00000531194 960 ntBASIC5.69□□□□□ -1.5
ATF3P18847 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF3P18847 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.69□□□□□ -1.5
ATF3P18847 AL390816.3-201ENST00000604527 1066 ntBASIC5.69□□□□□ -1.5
ATF3P18847 AC010201.1-201ENST00000605051 540 ntBASIC5.69□□□□□ -1.5
ATF3P18847 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.69□□□□□ -1.5
ATF3P18847 AP000255.1-201ENST00000610276 676 ntBASIC5.69□□□□□ -1.5
ATF3P18847 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF3P18847 AC006386.1-201ENST00000619436 415 ntBASIC5.69□□□□□ -1.5
ATF3P18847 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF3P18847 AC124312.6-202ENST00000623624 418 ntBASIC5.69□□□□□ -1.5
ATF3P18847 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF3P18847 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.69□□□□□ -1.5
ATF3P18847 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ATF3P18847 MTCO1P12-201ENST00000414273 1543 ntBASIC5.69□□□□□ -1.5
ATF3P18847 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF3P18847 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
ATF3P18847 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ATF3P18847 AC093535.2-201ENST00000624769 2326 ntBASIC5.68□□□□□ -1.5
ATF3P18847 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ATF3P18847 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ATF3P18847 AC011155.1-201ENST00000316512 456 ntBASIC5.68□□□□□ -1.5
ATF3P18847 RNU6-839P-201ENST00000363347 108 ntBASIC5.68□□□□□ -1.5
ATF3P18847 snoZ40.1-201ENST00000364540 72 ntBASIC5.68□□□□□ -1.5
ATF3P18847 U3.23-201ENST00000391132 200 ntBASIC5.68□□□□□ -1.5
ATF3P18847 AL592291.1-201ENST00000403830 352 ntBASIC5.68□□□□□ -1.5
ATF3P18847 MIR1911-201ENST00000410783 80 ntBASIC5.68□□□□□ -1.5
ATF3P18847 RPS29P4-201ENST00000414733 161 ntBASIC5.68□□□□□ -1.5
ATF3P18847 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF3P18847 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF3P18847 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.68□□□□□ -1.5
ATF3P18847 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.68□□□□□ -1.5
ATF3P18847 GEMIN8P3-201ENST00000445417 720 ntBASIC5.68□□□□□ -1.5
ATF3P18847 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ATF3P18847 RPL23AP15-201ENST00000450202 459 ntBASIC5.68□□□□□ -1.5
ATF3P18847 ABCF2P2-201ENST00000450549 296 ntBASIC5.68□□□□□ -1.5
ATF3P18847 AC005410.1-202ENST00000460347 485 ntBASIC5.68□□□□□ -1.5
ATF3P18847 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.68□□□□□ -1.5
ATF3P18847 RNA5SP135-201ENST00000517019 125 ntBASIC5.68□□□□□ -1.5
ATF3P18847 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF3P18847 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.68□□□□□ -1.5
ATF3P18847 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF3P18847 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATF3P18847 OR4C2P-201ENST00000530855 1064 ntBASIC5.68□□□□□ -1.5
ATF3P18847 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF3P18847 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF3P18847 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF3P18847 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF3P18847 GTF2IP22-201ENST00000554443 182 ntBASIC5.68□□□□□ -1.5
ATF3P18847 MIR3912-201ENST00000577566 105 ntBASIC5.68□□□□□ -1.5
ATF3P18847 AC015688.2-201ENST00000584523 262 ntBASIC5.68□□□□□ -1.5
ATF3P18847 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.68□□□□□ -1.5
ATF3P18847 AC234772.3-201ENST00000602277 528 ntBASIC5.68□□□□□ -1.5
ATF3P18847 AC015726.1-201ENST00000602353 681 ntBASIC5.68□□□□□ -1.5
ATF3P18847 AC022022.2-201ENST00000602989 360 ntBASIC5.68□□□□□ -1.5
ATF3P18847 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.68□□□□□ -1.5
ATF3P18847 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.68□□□□□ -1.5
ATF3P18847 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.68□□□□□ -1.5
ATF3P18847 RNA5SP439-201ENST00000617595 124 ntBASIC5.68□□□□□ -1.5
ATF3P18847 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.68□□□□□ -1.5
ATF3P18847 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms