Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MIR3939-201ENST00000582614 106 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC104785.1-201ENST00000603220 588 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC006077.1-201ENST00000604746 343 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AC024023.1-201ENST00000624530 922 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 AP000553.6-201ENST00000641242 118 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 ELL2P4-201ENST00000446870 1376 ntBASIC3.08□□□□□ -1.92
HLA-DQB1P01920 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB1P01920 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AL022722.2-201ENST00000402519 180 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 RPL21P65-201ENST00000406094 466 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 UBE2V1P15-201ENST00000407776 448 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 OR2AS1P-201ENST00000427827 319 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 CFTRP1-201ENST00000456646 183 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC089999.1-201ENST00000460336 374 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC010618.1-201ENST00000469924 477 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 RN7SL594P-201ENST00000470590 287 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 POU5F1P7-201ENST00000508759 541 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 SNORA70.19-201ENST00000516717 90 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 SCARNA14-201ENST00000516903 136 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 MTND4LP24-201ENST00000572277 291 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 KPNA2P3-201ENST00000584190 848 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC015726.1-201ENST00000602353 681 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AP003117.1-201ENST00000602771 554 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AL450270.1-201ENST00000606160 391 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 U6.98-201ENST00000637157 84 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 AC024560.2-201ENST00000507981 1497 ntBASIC3.07□□□□□ -1.92
HLA-DQB1P01920 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB1P01920 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AC008264.2-201ENST00000610193 3731 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 RNU6-98P-201ENST00000384173 107 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 XKRYP4-201ENST00000414395 483 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 TCEA1P4-201ENST00000415066 844 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 NDUFB4P5-201ENST00000415445 361 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 LINC01881-201ENST00000416103 412 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AL357078.2-201ENST00000416486 427 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 COX6CP17-201ENST00000421389 185 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 RPL30P3-201ENST00000424262 333 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AL035458.1-201ENST00000433096 585 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AC007000.2-201ENST00000442564 487 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 SETD6P1-201ENST00000444575 317 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 XKRYP5-201ENST00000449659 483 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 RN7SL283P-201ENST00000489055 303 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AC093278.1-201ENST00000494700 600 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
HLA-DQB1P01920 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB1P01920 AC093014.1-201ENST00000548926 724 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms