Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC008694.2-201ENST00000517591 306 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AC008562.1-201ENST00000521763 330 ntBASIC4.38□□□□□ -1.71
LDB2O43679 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.38□□□□□ -1.71
LDB2O43679 OR5BC1P-201ENST00000529327 739 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.38□□□□□ -1.71
LDB2O43679 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.38□□□□□ -1.71
LDB2O43679 AC084824.1-201ENST00000550917 1005 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.38□□□□□ -1.71
LDB2O43679 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.38□□□□□ -1.71
LDB2O43679 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.38□□□□□ -1.71
LDB2O43679 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LDB2O43679 MIR4999-201ENST00000585029 91 ntBASIC4.38□□□□□ -1.71
LDB2O43679 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
LDB2O43679 AC072039.2-201ENST00000608883 439 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AL139418.1-201ENST00000613613 177 ntBASIC4.38□□□□□ -1.71
LDB2O43679 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.38□□□□□ -1.71
LDB2O43679 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LDB2O43679 AC083809.1-201ENST00000615051 472 ntBASIC4.38□□□□□ -1.71
LDB2O43679 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.38□□□□□ -1.71
LDB2O43679 CDRT1-208ENST00000630868 794 ntBASIC4.38□□□□□ -1.71
LDB2O43679 FP325313.1-201ENST00000638228 703 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LDB2O43679 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.38□□□□□ -1.71
LDB2O43679 AP000526.1-201ENST00000603308 1388 ntBASIC4.38□□□□□ -1.71
LDB2O43679 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LDB2O43679 AC119744.1-201ENST00000454746 1715 ntBASIC4.38□□□□□ -1.71
LDB2O43679 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LDB2O43679 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDB2O43679 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LDB2O43679 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LDB2O43679 AC000123.3-201ENST00000624029 4975 ntBASIC4.37□□□□□ -1.71
LDB2O43679 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDB2O43679 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.37□□□□□ -1.71
LDB2O43679 AC017104.4-201ENST00000636283 1592 ntBASIC4.37□□□□□ -1.71
LDB2O43679 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LDB2O43679 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LDB2O43679 AC067945.1-201ENST00000342609 618 ntBASIC4.37□□□□□ -1.71
LDB2O43679 MIR331-201ENST00000362302 94 ntBASIC4.37□□□□□ -1.71
LDB2O43679 RNU6-839P-201ENST00000363347 108 ntBASIC4.37□□□□□ -1.71
LDB2O43679 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LDB2O43679 MIR217-201ENST00000384817 110 ntBASIC4.37□□□□□ -1.71
LDB2O43679 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDB2O43679 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.37□□□□□ -1.71
LDB2O43679 LUZP4P1-201ENST00000415420 344 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.37□□□□□ -1.71
LDB2O43679 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.37□□□□□ -1.71
LDB2O43679 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.37□□□□□ -1.71
LDB2O43679 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.37□□□□□ -1.71
LDB2O43679 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.37□□□□□ -1.71
LDB2O43679 ISCA1P2-201ENST00000438679 421 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AC093155.1-201ENST00000440164 826 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.37□□□□□ -1.71
LDB2O43679 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.37□□□□□ -1.71
LDB2O43679 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.37□□□□□ -1.71
LDB2O43679 AC104306.1-201ENST00000449702 371 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AC073387.1-201ENST00000453261 709 ntBASIC4.37□□□□□ -1.71
LDB2O43679 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.37□□□□□ -1.71
LDB2O43679 RN7SL812P-201ENST00000493791 279 ntBASIC4.37□□□□□ -1.71
LDB2O43679 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LDB2O43679 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LDB2O43679 AC010285.3-201ENST00000511668 676 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.37□□□□□ -1.71
LDB2O43679 RNU6-1225P-201ENST00000516336 65 ntBASIC4.37□□□□□ -1.71
LDB2O43679 RN7SKP283-201ENST00000517197 270 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.37□□□□□ -1.71
LDB2O43679 IGLV3-26-201ENST00000520756 302 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.37□□□□□ -1.71
LDB2O43679 UBE2NP1-201ENST00000545592 458 ntBASIC4.37□□□□□ -1.71
LDB2O43679 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.37□□□□□ -1.71
LDB2O43679 ISCA1P3-201ENST00000577104 373 ntBASIC4.37□□□□□ -1.71
LDB2O43679 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LDB2O43679 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.37□□□□□ -1.71
LDB2O43679 AL390838.2-201ENST00000602394 274 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AL163642.2-201ENST00000604722 1019 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AL592221.1-201ENST00000605266 382 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AC122133.1-201ENST00000613964 233 ntBASIC4.37□□□□□ -1.71
LDB2O43679 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LDB2O43679 AC007546.1-201ENST00000619452 559 ntBASIC4.37□□□□□ -1.71
LDB2O43679 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDB2O43679 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.37□□□□□ -1.71
LDB2O43679 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.37□□□□□ -1.71
LDB2O43679 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.37□□□□□ -1.71
LDB2O43679 ZNF542P-204ENST00000482727 1305 ntBASIC4.37□□□□□ -1.71
LDB2O43679 AC109315.1-201ENST00000584143 1347 ntBASIC4.37□□□□□ -1.71
LDB2O43679 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.37□□□□□ -1.71
LDB2O43679 AL445523.1-201ENST00000451184 1362 ntBASIC4.37□□□□□ -1.71
LDB2O43679 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDB2O43679 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LDB2O43679 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LDB2O43679 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
LDB2O43679 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.36□□□□□ -1.71
LDB2O43679 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.36□□□□□ -1.71
LDB2O43679 RNU6-553P-201ENST00000364047 96 ntBASIC4.36□□□□□ -1.71
LDB2O43679 RNU6-304P-201ENST00000364855 107 ntBASIC4.36□□□□□ -1.71
LDB2O43679 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDB2O43679 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms