Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN4O14493 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN4O14493 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLDN4O14493 RN7SKP44-201ENST00000363602 316 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 RNU6-1243P-201ENST00000364028 107 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 RNU1-85P-201ENST00000364127 164 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 RNU6-115P-201ENST00000364310 107 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 SNORA72.3-201ENST00000365074 132 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 Y_RNA.472-201ENST00000384322 102 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLDN4O14493 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 AL133264.1-201ENST00000407157 562 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN4O14493 AL139095.3-201ENST00000419672 1203 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 PDSS1P1-201ENST00000422953 1114 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.06□□□□□ -1.76
CLDN4O14493 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 RPL23AP52-201ENST00000439311 478 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 BX276092.4-201ENST00000452056 248 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 RPL23AP81-201ENST00000455252 467 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 AC005008.1-201ENST00000456151 612 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN4O14493 RPL7P22-201ENST00000466005 733 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 AC010618.1-201ENST00000469924 477 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 RPL35P6-201ENST00000490024 372 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 DEFB109F-201ENST00000491870 277 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN4O14493 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN4O14493 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN4O14493 AC093755.1-201ENST00000512950 1023 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 AC016065.2-201ENST00000514530 444 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN4O14493 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN4O14493 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN4O14493 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.06□□□□□ -1.76
CLDN4O14493 AL109766.1-201ENST00000555080 552 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN4O14493 AGGF1P6-201ENST00000569213 976 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 AP001180.3-201ENST00000582221 145 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN4O14493 MTCO2P2-201ENST00000591258 225 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 AC010680.4-201ENST00000605334 543 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN4O14493 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN4O14493 AC019278.1-201ENST00000623516 479 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 AC090506.2-201ENST00000624521 419 ntBASIC4.06□□□□□ -1.76
CLDN4O14493 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN4O14493 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN4O14493 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN4O14493 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN4O14493 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CLDN4O14493 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CLDN4O14493 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN4O14493 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN4O14493 MTND5P31-201ENST00000419366 1374 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN4O14493 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CLDN4O14493 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN4O14493 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN4O14493 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN4O14493 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CLDN4O14493 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN4O14493 MIR217-201ENST00000384817 110 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 SNORA48.7-201ENST00000391302 135 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN4O14493 AC097374.1-203ENST00000400783 485 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 BTBD10P2-201ENST00000404779 676 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 HDGFP1-201ENST00000405943 252 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CLDN4O14493 RNU6-584P-201ENST00000410350 95 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 RN7SKP263-201ENST00000411194 309 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 OR4K6P-201ENST00000416478 897 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 AL161631.1-201ENST00000417933 486 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 RPS12P23-201ENST00000419579 400 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 RPF2P1-201ENST00000424137 906 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN4O14493 Z93242.1-201ENST00000427102 353 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 AC114973.1-201ENST00000429057 632 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 IFNNP1-201ENST00000429219 553 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 KCTD10P1-201ENST00000434203 625 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 RPS3AP54-201ENST00000435535 734 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN4O14493 OR10R1P-201ENST00000441524 1141 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 RRM2P4-201ENST00000441721 562 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN4O14493 AC112492.1-201ENST00000449607 712 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 AL009048.1-201ENST00000450437 298 ntBASIC4.05□□□□□ -1.76
CLDN4O14493 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms