Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
BIVM-ERCC5R4GMW8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
BIVM-ERCC5R4GMW8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
BIVM-ERCC5R4GMW8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
BIVM-ERCC5R4GMW8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 RNA5SP31-201ENST00000411144 127 ntBASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 NUP35P1-201ENST00000422734 947 ntBASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 OR2A20P-203ENST00000498397 1268 ntBASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 VN1R104P-201ENST00000505115 1009 ntBASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 HMGB1P19-201ENST00000517578 577 ntBASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC087276.1-201ENST00000529659 480 ntBASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 HMGN2P47-201ENST00000559378 272 ntBASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.21□□□□□ -1.58
BIVM-ERCC5R4GMW8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 RPL5P18-201ENST00000406671 891 ntBASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 MRPS31P2-201ENST00000451581 518 ntBASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC090543.2-201ENST00000483963 348 ntBASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 RPL5P23-201ENST00000496040 868 ntBASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC026801.2-201ENST00000515352 425 ntBASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 RN7SKP132-201ENST00000516001 208 ntBASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 H3F3AP1-201ENST00000559984 334 ntBASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC018552.3-201ENST00000567416 561 ntBASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
BIVM-ERCC5R4GMW8 SNORA5B-201ENST00000363786 132 ntBASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 RNU6-316P-201ENST00000391027 107 ntBASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC112653.1-201ENST00000443851 386 ntBASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC135001.1-201ENST00000544546 283 ntBASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 SETP5-201ENST00000437270 562 ntBASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC093156.1-201ENST00000440382 670 ntBASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC245100.7-201ENST00000609678 442 ntBASIC5.19□□□□□ -1.58
BIVM-ERCC5R4GMW8 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 RPL7P25-201ENST00000404151 721 ntBASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 CST9LP2-201ENST00000437612 320 ntBASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 MTCO3P20-201ENST00000454926 688 ntBASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 KC877373.1-201ENST00000479066 408 ntBASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 AL022311.1-201ENST00000623726 19416 ntBASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
BIVM-ERCC5R4GMW8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 SNORA48.8-201ENST00000391324 134 ntBASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 SETP15-201ENST00000412724 337 ntBASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC092447.2-201ENST00000435487 669 ntBASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 RPS24P13-201ENST00000442520 397 ntBASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 MIR4319-201ENST00000577285 85 ntBASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 KC877982.1-201ENST00000602313 470 ntBASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 AL450472.3-201ENST00000615578 367 ntBASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC5.17□□□□□ -1.58
BIVM-ERCC5R4GMW8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BIVM-ERCC5R4GMW8 SNORA18.3-201ENST00000384122 132 ntBASIC5.16□□□□□ -1.58
BIVM-ERCC5R4GMW8 RPL12P26-201ENST00000452430 487 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms