Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RPL31P45-201ENST00000419532 356 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 RPL23AP82-202ENST00000427528 469 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 ARF4P2-201ENST00000430209 526 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC007389.2-201ENST00000434630 306 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 RRM2P4-201ENST00000441721 562 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC008264.1-201ENST00000447612 367 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AL157884.3-201ENST00000448273 1184 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 RPS4XP2-201ENST00000458402 793 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC010401.1-201ENST00000463867 348 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AL161747.1-201ENST00000480068 358 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC092451.1-201ENST00000480211 153 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 SNORA70.17-201ENST00000516449 133 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AP001636.2-201ENST00000525517 696 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC103843.2-201ENST00000530523 682 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC011602.1-201ENST00000546484 331 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC006270.2-201ENST00000578523 652 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AP003117.1-201ENST00000602771 554 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AL365440.1-201ENST00000436135 2167 ntBASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AL645937.1-201ENST00000641739 1652 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 SNORA5A-201ENST00000384111 134 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 PTMAP5-201ENST00000393073 333 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AL445189.1-201ENST00000405722 338 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 RN7SKP111-201ENST00000410349 271 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 RN7SKP202-201ENST00000410439 330 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 USP9YP31-201ENST00000431405 881 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AL353898.1-201ENST00000444055 238 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AC006539.3-201ENST00000454258 129 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 CFTRP1-201ENST00000456646 183 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 HMGB3P30-201ENST00000457863 606 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 RPL7P15-201ENST00000461190 712 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AC104619.4-201ENST00000510773 249 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 MTCO1P30-201ENST00000515244 580 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 FABP5P12-201ENST00000515543 389 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 MIR2276-201ENST00000516886 89 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 PAICSP4-201ENST00000517543 1253 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 GTF2IP22-201ENST00000554443 182 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AC106785.1-201ENST00000565935 262 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AC067852.3-201ENST00000589177 561 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AC005229.3-201ENST00000603438 323 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 RPL23AP61-201ENST00000623642 466 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 AC009093.8-201ENST00000641769 292 ntBASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VPS29Q9UBQ0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.89
VPS29Q9UBQ0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 SEPT7P7-201ENST00000420492 1301 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 AP002088.1-201ENST00000382740 395 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 RAB9AP3-201ENST00000412737 573 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 Z99755.1-201ENST00000414048 380 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 AL356968.1-201ENST00000416622 474 ntBASIC3.27□□□□□ -1.89
VPS29Q9UBQ0 MTND4P11-201ENST00000417020 1058 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms