Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RN7SKP34-201ENST00000516142 244 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 HIGD1AP18-201ENST00000520730 278 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AL592437.2-201ENST00000421655 2434 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AL122016.1-201ENST00000403365 367 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 ISCA1P2-201ENST00000438679 421 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 PHBP14-201ENST00000512887 367 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 IGHV3-32-201ENST00000519182 355 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 MIR4425-201ENST00000580572 84 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 FAR1P1-201ENST00000427163 934 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 ATP5C1P1-201ENST00000441945 895 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AC021678.1-201ENST00000505195 936 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AL109741.3-201ENST00000561748 592 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3□□□□□ -1.93
KIAA1549Q9HCM3 MIR4325-201ENST00000583049 90 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 VN1R79P-201ENST00000593540 513 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AC015802.5-201ENST00000607478 399 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 RNVU1-4-201ENST00000612985 164 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AC009464.1-201ENST00000615731 469 ntBASIC3□□□□□ -1.93
KIAA1549Q9HCM3 AL451142.2-201ENST00000429076 2090 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 AC007496.3-201ENST00000624987 3443 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 RNA5SP374-201ENST00000362939 125 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 LIPT1P1-201ENST00000415870 1186 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 AL365396.1-201ENST00000430854 671 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 RPL23AP69-201ENST00000431134 458 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 AC023598.1-201ENST00000472521 361 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 APOOP4-201ENST00000513530 597 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 OR4A2P-201ENST00000527276 913 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 AC087888.1-201ENST00000550884 1254 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 AL139286.1-201ENST00000604465 483 ntBASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KIAA1549Q9HCM3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 AC093010.3-201ENST00000570269 15214 ntBASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 AC234772.1-201ENST00000377927 937 ntBASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 AC135507.2-201ENST00000612443 309 ntBASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
KIAA1549Q9HCM3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms