Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD8Q9HCK8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 RNA5SP325-201ENST00000363756 130 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 RNA5SP229-201ENST00000410809 99 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 RNU4-47P-201ENST00000410876 114 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 JKAMPP1-201ENST00000413804 919 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 AC063979.1-201ENST00000415539 377 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 RPL35AP12-201ENST00000425362 338 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 Y_RNA.670-201ENST00000516255 105 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 MRPS21P9-201ENST00000571150 257 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 AC010680.4-201ENST00000605334 543 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 CYCSP41-201ENST00000616920 296 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 U3.39-201ENST00000408569 239 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 AC063976.3-201ENST00000426849 329 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 AC099563.1-201ENST00000456086 418 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 RPS29P26-201ENST00000477483 171 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 HMGB1P3-201ENST00000502802 616 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 KLHL2P1-201ENST00000508691 521 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 NPM1P5-201ENST00000557228 838 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 AC128687.2-201ENST00000609657 566 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 AC006504.1-201ENST00000562493 3666 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 CR383658.2-201ENST00000547576 1525 ntBASIC3.11□□□□□ -1.91
CHD8Q9HCK8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.11□□□□□ -1.91
CHD8Q9HCK8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 RSL24D1P1-201ENST00000404972 493 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 UBE2D3P1-201ENST00000436669 444 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 AC112492.1-201ENST00000449607 712 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 AC006480.1-201ENST00000449887 378 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 AC006363.1-201ENST00000603806 463 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 AC097505.1-201ENST00000610199 565 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 AL591424.2-201ENST00000617023 128 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 RNA5SP480-201ENST00000516840 109 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 OR6R2P-201ENST00000609216 300 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 AL356274.1-201ENST00000617064 410 ntBASIC3.1□□□□□ -1.91
CHD8Q9HCK8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.1□□□□□ -1.91
CHD8Q9HCK8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AC027281.1-201ENST00000574178 758 ntBASIC3.09□□□□□ -1.91
CHD8Q9HCK8 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AL672296.1-201ENST00000427780 2158 ntBASIC3.09□□□□□ -1.91
CHD8Q9HCK8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AC091564.4-201ENST00000533934 2194 ntBASIC3.09□□□□□ -1.91
CHD8Q9HCK8 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 SNORD114-26-201ENST00000363543 72 ntBASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AP000926.4-201ENST00000527351 454 ntBASIC3.09□□□□□ -1.91
CHD8Q9HCK8 TRAV15-201ENST00000556680 249 ntBASIC3.09□□□□□ -1.91
CHD8Q9HCK8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 MTND6P33-201ENST00000571794 183 ntBASIC3.09□□□□□ -1.91
CHD8Q9HCK8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.09□□□□□ -1.91
CHD8Q9HCK8 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.09□□□□□ -1.91
CHD8Q9HCK8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.09□□□□□ -1.92
CHD8Q9HCK8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.09□□□□□ -1.92
CHD8Q9HCK8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CHD8Q9HCK8 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 AC067945.1-201ENST00000342609 618 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 MIR181A2-201ENST00000384863 110 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 AC009963.4-201ENST00000448535 339 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms