Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 RNU5B-4P-201ENST00000363508 111 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 RNU6-298P-201ENST00000390888 96 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 RNA5SP424-201ENST00000390988 115 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 ATF1P1-201ENST00000406040 927 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC009480.2-201ENST00000422916 432 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 MTCO3P21-201ENST00000430791 643 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AL353597.2-202ENST00000434901 373 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 SNORA71B-202ENST00000439232 272 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 RNU7-27P-201ENST00000459281 62 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC092045.1-201ENST00000495716 1231 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC025459.1-201ENST00000504072 156 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 ARL2BPP6-201ENST00000512757 439 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 RNU6-1308P-201ENST00000516817 103 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 NDUFA5P2-201ENST00000519723 344 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC022884.3-201ENST00000579571 248 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 MIR4425-201ENST00000580572 84 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 RN7SL622P-201ENST00000585292 275 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AL022067.1-201ENST00000602426 454 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC099785.1-201ENST00000605697 437 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AP006248.2-201ENST00000623309 592 ntBASIC4.57□□□□□ -1.68
UPF2Q9HAU5 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 ZNF29P-201ENST00000225587 168 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 RN7SKP44-201ENST00000363602 316 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 SNORD56.4-201ENST00000363883 71 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 MIR184-201ENST00000384962 84 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 U3.22-201ENST00000391120 215 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 RN7SKP285-201ENST00000410137 318 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 RNU2-17P-201ENST00000410290 190 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 RPL26P29-201ENST00000415623 438 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 HMGB3P5-201ENST00000428894 612 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC092013.1-201ENST00000438795 332 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 RPS27P5-201ENST00000444247 244 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC069540.1-201ENST00000446320 988 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 EXOSC3P1-201ENST00000448649 500 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 DUXAP8-207ENST00000456786 622 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 RPS3AP50-201ENST00000487064 803 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 RN7SKP60-201ENST00000516985 239 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AP003730.1-201ENST00000524605 285 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AL139174.1-201ENST00000531489 886 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC012254.4-201ENST00000588843 273 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AC090948.2-201ENST00000607363 564 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 OR6R2P-201ENST00000609216 300 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AL136295.6-201ENST00000610486 658 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 DUXAP10-204ENST00000612052 616 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AF001550.2-201ENST00000636643 217 ntBASIC4.56□□□□□ -1.68
UPF2Q9HAU5 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPF2Q9HAU5 CYP1D1P-201ENST00000416662 1433 ntBASIC4.55□□□□□ -1.68
UPF2Q9HAU5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPF2Q9HAU5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UPF2Q9HAU5 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPF2Q9HAU5 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UPF2Q9HAU5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPF2Q9HAU5 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms