Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC011712.1-201ENST00000588959 234 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 CYP4F35P-202ENST00000636121 390 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 RNU1-32P-201ENST00000363937 159 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 MIR192-201ENST00000384915 110 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 MIR320B1-201ENST00000390209 79 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 MIR320C1-201ENST00000408566 88 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 RPL7P11-201ENST00000437586 658 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 LSM1P1-201ENST00000438629 273 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 HMGB3P12-201ENST00000438745 556 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 SLC31A1P1-201ENST00000451221 567 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 C1DP4-201ENST00000455429 424 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC103987.1-201ENST00000473394 348 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 POU5F1P7-201ENST00000508759 541 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 IGKV2-23-201ENST00000518729 323 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC068587.4-201ENST00000533893 186 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC063949.1-201ENST00000552900 865 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 BNIP3P5-201ENST00000562290 498 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC005341.1-201ENST00000571086 708 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC022432.1-201ENST00000595739 310 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC234771.5-201ENST00000600161 514 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC087283.1-201ENST00000604029 1074 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AL161734.1-201ENST00000609720 557 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC104010.1-201ENST00000616889 150 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC018926.3-201ENST00000618841 406 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC091953.3-201ENST00000623220 236 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC091905.1-201ENST00000624400 311 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 PISRT1-201ENST00000626175 531 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 DBF4P1-201ENST00000412976 1892 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AP000432.2-201ENST00000624164 2048 ntBASIC6.16□□□□□ -1.42
SYNGAP1Q96PV0 AC114947.2-201ENST00000565748 2125 ntBASIC6.15□□□□□ -1.42
SYNGAP1Q96PV0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNGAP1Q96PV0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SYNGAP1Q96PV0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
SYNGAP1Q96PV0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SYNGAP1Q96PV0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNGAP1Q96PV0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNGAP1Q96PV0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SYNGAP1Q96PV0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNGAP1Q96PV0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 SNORA70.2-201ENST00000364506 135 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 VN1R8P-201ENST00000407739 893 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 RSU1P3-201ENST00000412878 835 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 MTND3P17-201ENST00000416968 344 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 RPL22P17-201ENST00000438729 315 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AL935212.3-201ENST00000450729 284 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 RPS29P25-201ENST00000481709 171 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 RPL35P6-201ENST00000490024 372 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 NIFKP7-201ENST00000503365 834 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC093815.1-201ENST00000508637 280 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 KCTD9P2-201ENST00000512203 1013 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 OR4A12P-201ENST00000530847 918 ntBASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.15□□□□□ -1.43
SYNGAP1Q96PV0 AC093027.1-201ENST00000546698 429 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms