Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.74□□□□□ -1.81
C9orf72Q96LT7 TRAV11-201ENST00000539512 339 ntBASIC3.74□□□□□ -1.81
C9orf72Q96LT7 AL121766.1-201ENST00000547436 487 ntBASIC3.74□□□□□ -1.81
C9orf72Q96LT7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.74□□□□□ -1.81
C9orf72Q96LT7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
C9orf72Q96LT7 AL049870.4-201ENST00000555741 486 ntBASIC3.74□□□□□ -1.81
C9orf72Q96LT7 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.74□□□□□ -1.81
C9orf72Q96LT7 AC087499.8-201ENST00000578406 226 ntBASIC3.74□□□□□ -1.81
C9orf72Q96LT7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.74□□□□□ -1.81
C9orf72Q96LT7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.74□□□□□ -1.81
C9orf72Q96LT7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
C9orf72Q96LT7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.74□□□□□ -1.81
C9orf72Q96LT7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
C9orf72Q96LT7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.74□□□□□ -1.81
C9orf72Q96LT7 AC025125.1-201ENST00000624743 1922 ntBASIC3.74□□□□□ -1.81
C9orf72Q96LT7 DCAF13P3-201ENST00000561147 1334 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 RNU1-87P-201ENST00000363727 170 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 RAB9AP3-201ENST00000412737 573 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AC006989.1-201ENST00000427212 131 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 MED6P1-201ENST00000439659 713 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 RAB9AP1-201ENST00000449393 573 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 RNU7-170P-201ENST00000459303 61 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AC004801.2-202ENST00000463559 283 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 OR5H4P-201ENST00000510851 923 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AL049634.3-201ENST00000604968 457 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 AL732372.2-225ENST00000642124 456 ntBASIC3.73□□□□□ -1.81
C9orf72Q96LT7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
C9orf72Q96LT7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 U8.11-201ENST00000384699 133 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 U8.12-201ENST00000384701 133 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 MTND2P15-201ENST00000418575 892 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 UBDP1-202ENST00000457888 382 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 U8.18-201ENST00000459285 133 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AC022034.3-201ENST00000471393 478 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AC084357.1-201ENST00000473404 255 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AC107398.1-201ENST00000486904 505 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 RPL23AP73-201ENST00000492507 471 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 RPL7P47-201ENST00000497299 556 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 HMGB1P3-201ENST00000502802 616 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AC026784.1-201ENST00000507986 352 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 MIR4425-201ENST00000580572 84 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AP001180.3-201ENST00000582221 145 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 AP004607.9-201ENST00000618202 316 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 MIR6075-201ENST00000620782 95 ntBASIC3.72□□□□□ -1.81
C9orf72Q96LT7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.72□□□□□ -1.81
C9orf72Q96LT7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
C9orf72Q96LT7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf72Q96LT7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.71□□□□□ -1.82
C9orf72Q96LT7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf72Q96LT7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf72Q96LT7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf72Q96LT7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf72Q96LT7 MTHFD2P2-201ENST00000407725 247 ntBASIC3.71□□□□□ -1.82
C9orf72Q96LT7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.71□□□□□ -1.82
C9orf72Q96LT7 LINC01881-201ENST00000416103 412 ntBASIC3.71□□□□□ -1.82
C9orf72Q96LT7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.71□□□□□ -1.82
C9orf72Q96LT7 AL031736.2-201ENST00000426573 787 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms