Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL354714.3-201ENST00000447284 493 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 NANOGNBP1-201ENST00000448444 480 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.81□□□□□ -1.48
DDX11Q96FC9 DNAJC19P8-201ENST00000452887 259 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.81□□□□□ -1.48
DDX11Q96FC9 AC063943.1-201ENST00000465434 453 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 IGLV2-34-201ENST00000490007 283 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 CEACAMP10-202ENST00000495431 496 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.81□□□□□ -1.48
DDX11Q96FC9 AC090071.1-201ENST00000507713 644 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 AC093281.2-201ENST00000510153 597 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 TCP11X3P-202ENST00000514289 1254 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 OR7K1P-201ENST00000546439 926 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.81□□□□□ -1.48
DDX11Q96FC9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.81□□□□□ -1.48
DDX11Q96FC9 GTF2IP22-201ENST00000554443 182 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 AL390334.1-201ENST00000556395 450 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 AC009063.1-201ENST00000563342 702 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 SNORA59B-202ENST00000578183 701 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 MIR4737-201ENST00000583979 81 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 RN7SL435P-201ENST00000584418 282 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.81□□□□□ -1.48
DDX11Q96FC9 AC023813.4-201ENST00000607580 580 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.81□□□□□ -1.48
DDX11Q96FC9 AC025048.6-202ENST00000627667 438 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
DDX11Q96FC9 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.81□□□□□ -1.48
DDX11Q96FC9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.81□□□□□ -1.48
DDX11Q96FC9 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DDX11Q96FC9 SDAD1P1-202ENST00000524156 2051 ntBASIC5.81□□□□□ -1.48
DDX11Q96FC9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 SAMMSON-213ENST00000641336 1521 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 NSRP1P1-201ENST00000444067 1693 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 RNU6-259P-201ENST00000383999 107 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 RNU6-452P-201ENST00000384406 107 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 RNU6-114P-201ENST00000384704 105 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 RNA5SP296-201ENST00000410523 111 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC016397.1-201ENST00000412463 242 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AL590139.1-201ENST00000416267 400 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC245052.5-201ENST00000416320 649 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 USP9YP18-201ENST00000425912 695 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 RPS25P9-201ENST00000435591 252 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 SNRPEP8-201ENST00000442866 260 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC009220.1-201ENST00000451614 275 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 RPL7AP10-201ENST00000481016 791 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 GAPDHP39-201ENST00000481866 979 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC008897.1-201ENST00000494006 347 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 OR51K1P-201ENST00000510214 950 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 RNU6-718P-201ENST00000516166 105 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 RNU6-1004P-201ENST00000516584 111 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 OR4K7P-201ENST00000580232 945 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 SS18L2P2-201ENST00000583960 235 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AP001330.5-201ENST00000607176 411 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AL589743.7-201ENST00000612637 233 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC138932.5-201ENST00000617759 563 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AC015726.3-201ENST00000624501 418 ntBASIC5.8□□□□□ -1.48
DDX11Q96FC9 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.8□□□□□ -1.48
DDX11Q96FC9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DDX11Q96FC9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms