Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 AL034370.1-201ENST00000397254 1590 ntBASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.71□□□□□ -1.5
SMARCC2Q8TAQ2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 RNU6-374P-201ENST00000364146 108 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 UBBP2-201ENST00000376781 231 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 MIR525-201ENST00000384978 85 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 FGF7P8-201ENST00000402994 292 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 RN7SKP56-201ENST00000410513 331 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 OR51A5P-201ENST00000415429 942 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 RPL21P32-201ENST00000419877 477 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 MTCO3P1-205ENST00000422088 832 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 RWDD4P2-201ENST00000426392 563 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC092162.1-201ENST00000432828 434 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC093716.1-201ENST00000435923 377 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AL353093.1-201ENST00000441292 436 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 MTND3P10-201ENST00000450967 341 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC098824.1-201ENST00000453565 980 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 PNPLA4P1-201ENST00000458328 305 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 MTND6P6-201ENST00000478031 263 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 VPS26AP1-201ENST00000483197 979 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AL358832.1-201ENST00000497800 389 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 Y_RNA.719-201ENST00000517156 106 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 OR5BC1P-201ENST00000529327 739 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC025260.1-201ENST00000548858 430 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC124947.2-202ENST00000552735 133 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 ANP32BP3-201ENST00000559213 706 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 C8orf59P2-201ENST00000603441 271 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC025449.1-201ENST00000603896 529 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC024560.3-201ENST00000608482 349 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AP001521.2-201ENST00000608772 546 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC092954.2-201ENST00000609103 430 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AC009704.2-201ENST00000618739 483 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 AL731566.1-201ENST00000620490 1937 ntBASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SMARCC2Q8TAQ2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 CR383658.2-201ENST00000547576 1525 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 SMG1P6-201ENST00000532337 2930 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 AL354685.2-201ENST00000448218 1447 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 HMGB1P5-201ENST00000255320 642 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 RNU4-12P-201ENST00000365233 139 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 RNU6-1263P-201ENST00000384601 106 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 RNU6-1011P-201ENST00000384668 107 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 CIR1P3-201ENST00000405137 479 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 U3.35-201ENST00000408405 208 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 TBCAP2-201ENST00000416175 326 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 RPL36AP10-201ENST00000421785 322 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 SEPT7P5-201ENST00000434048 306 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 RPL7P11-201ENST00000437586 658 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 AC006466.1-201ENST00000438721 289 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 AC004865.1-201ENST00000442276 1003 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 MTATP6P30-201ENST00000443540 664 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 RPS4XP15-201ENST00000489210 795 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 DYNLL1P6-201ENST00000503440 264 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 RNU6-507P-201ENST00000516045 100 ntBASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.69□□□□□ -1.5
SMARCC2Q8TAQ2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms